RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 NAXDQ8IW45 347 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CLECL1Q8IZS7 167 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 HS3ST5Q8IZT8 346 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 TBC1D19Q8N5T2 526 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 TMCO5AQ8N6Q1 288 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 IL17RCQ8NAC3 791 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 SPPL2AQ8TCT8 520 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 SLC38A4Q969I6 547 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 ABTB1Q969K4 478 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 NEIL2Q969S2 332 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 MOAP1Q96BY2 351 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 TCEAL4Q96EI5 215 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 SH3YL1Q96HL8 342 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 TPD52L3Q96J77 140 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 EGLN2Q96KS0 407 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 SIGLEC11Q96RL6 698 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 MTERF1Q99551 399 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 SLC35A5Q9BS91 424 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 COPS4Q9BT78 406 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 MROQ9BYG7 248 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 MS4A7Q9GZW8 240 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 A4GALTQ9NPC4 353 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 SLC6A13Q9NSD5 602 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 ACSS1Q9NUB1 689 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 EXD2Q9NVH0 621 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 FKBP14Q9NWM8 211 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 IMPAD1Q9NX62 359 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CCDC59Q9P031 241 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 NDUFAF4Q9P032 175 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 SPASTQ9UBP0 616 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CD84Q9UIB8 345 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 PSORS1C1Q9UIG5 152 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 PILRBQ9UKJ0 227 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CFL2Q9Y281 166 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 UGT2A1Q9Y4X1 527 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 KLK4Q9Y5K2 254 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 LYVE1Q9Y5Y7 322 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 ENPP4Q9Y6X5 453 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 TEP1Q99973 2627 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 A0A1W2PRB8 838 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 A1L4Q6 167 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 OR2A25A4D2G3 310 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 MBD3L4A6NDZ8 208 aaPredicted RBP4.92□□□□□ -1.62
CAPN3-217ENST00000567817 MBD3L3A6NE82 208 aaPredicted RBP4.92□□□□□ -1.62
CAPN3-217ENST00000567817 TRABD2BA6NFA1 517 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 ANKDD1BA6NHY2 528 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 LINC01548A6NM66 108 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 ISM1B1AKI9 464 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 C5orf58C9J3I9 102 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 KPNA3O00505 521 aaPredicted RBP4.92□□□□□ -1.62
CAPN3-217ENST00000567817 FAAHO00519 579 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 MOSPD3O75425 235 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 MTX2O75431 263 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 POP7O75817 140 aaKnown RBP4.92□□□□□ -1.62
CAPN3-217ENST00000567817 INMTO95050 263 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 CCNB2O95067 398 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 SNX4O95219 450 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 CDK1P06493 297 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 ADRB3P13945 408 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 CD36P16671 472 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 NPPBP16860 134 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 CDH3P22223 829 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 PRKACGP22612 351 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 PSMB9P28065 219 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 ACADLP28330 430 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 PPP2R1BP30154 601 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 IFNA8P32881 189 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 S100A5P33763 92 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 SOX6P35712 828 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 IFNGR2P38484 337 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 EIF2S3P41091 472 aaKnown RBP4.92□□□□□ -1.62
CAPN3-217ENST00000567817 P2RY2P41231 377 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 XCR1P46094 333 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 BDKRB1P46663 353 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 CCR8P51685 355 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 PPP5CP53041 499 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 DSTNP60981 165 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 HBA1P69905 142 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 IL1RL1Q01638 556 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 SPIBQ01892 262 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 SEMG2Q02383 582 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 C2orf80Q0P641 193 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 COX10Q12887 443 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 GAB1Q13480 694 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 RUNX3Q13761 415 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 TIGD6Q17RP2 521 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 ZNF404Q494X3 552 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 IQCCQ4KMZ1 466 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 TMEM35AQ53FP2 167 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 PLA1AQ53H76 456 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 PRAMEF8Q5VWM4 474 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 PRAMEF7Q5VXH5 474 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 MEDAGQ5VYS4 303 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 RAET1GQ6H3X3 334 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 REEP3Q6NUK4 255 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 ANGPTL8Q6UXH0 198 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 DCDC5Q6ZRR9 648 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 RFLNAQ6ZTI6 216 aa4.92□□□□□ -1.62
CAPN3-217ENST00000567817 PARS2Q7L3T8 475 aaKnown RBP4.92□□□□□ -1.62
CAPN3-217ENST00000567817 VTCN1Q7Z7D3 282 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms