RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 PCNX3Q9H6A9 2034 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 A0A1W2PRB8 838 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 CCT8L1PA6NM43 557 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 PHGDHO43175 533 aaKnown RBP12.04□□□□□ -0.48
SMG1-213ENST00000567737 WISP3O95389 354 aaPredicted RBP12.04□□□□□ -0.48
SMG1-213ENST00000567737 LTA4HP09960 611 aaKnown RBP12.04□□□□□ -0.48
SMG1-213ENST00000567737 DAOP14920 347 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 DDX5P17844 614 aaKnown RBP12.04□□□□□ -0.48
SMG1-213ENST00000567737 PSMD4P55036 377 aaKnown RBP12.04□□□□□ -0.48
SMG1-213ENST00000567737 PRR5P85299 388 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 MGAT5Q09328 741 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 PLPPR5Q32ZL2 321 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 HP1BP3Q5SSJ5 553 aaPredicted RBP12.04□□□□□ -0.48
SMG1-213ENST00000567737 RNASEH2BQ5TBB1 312 aaKnown RBP12.04□□□□□ -0.48
SMG1-213ENST00000567737 STAG3L4Q8TBR4 150 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 RNF217Q8TC41 542 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 MAGOHBQ96A72 148 aaKnown RBP12.04□□□□□ -0.48
SMG1-213ENST00000567737 PKP2Q99959 881 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 PSD2Q9BQI7 771 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 DESI2Q9BSY9 194 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 ALG9Q9H6U8 611 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 CXorf36Q9H7Y0 433 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 UNKLQ9H9P5 680 aaKnown RBP12.04□□□□□ -0.48
SMG1-213ENST00000567737 CAB39LQ9H9S4 337 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 MED17Q9NVC6 651 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 CHMP2BQ9UQN3 213 aa12.04□□□□□ -0.48
SMG1-213ENST00000567737 GOLGA6L10A0A0M3HER8 536 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 GJE1A6NN92 205 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 ATP6V1G2-DDX39BF2Z307 99 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 RGS14O43566 566 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 COQ9O75208 318 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 SLU7O95391 586 aaKnown RBP12.03□□□□□ -0.48
SMG1-213ENST00000567737 UTS2O95399 124 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 BCL10O95999 233 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 ERCC1P07992 297 aaPredicted RBP12.03□□□□□ -0.48
SMG1-213ENST00000567737 PGCP20142 388 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 EDNRAP25101 427 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 SHC1P29353 583 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 ELK3P41970 407 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 PIK3CGP48736 1102 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 MANFP55145 182 aaKnown RBP12.03□□□□□ -0.48
SMG1-213ENST00000567737 UBA52P62987 128 aaKnown RBP12.03□□□□□ -0.48
SMG1-213ENST00000567737 ILF2Q12905 390 aaKnown RBP12.03□□□□□ -0.48
SMG1-213ENST00000567737 TRIP10Q15642 601 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 UBE2J2Q8N2K1 259 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 TM4SF18Q96CE8 201 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 Q9N2J8 555 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 DDX28Q9NUL7 540 aaKnown RBP12.03□□□□□ -0.48
SMG1-213ENST00000567737 MCM8Q9UJA3 840 aa12.03□□□□□ -0.48
SMG1-213ENST00000567737 ARFGEF3Q5TH69 2177 aa12.02□□□□□ -0.48
SMG1-213ENST00000567737 IGHV3-15A0A0B4J1V0 119 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 A6NJY4 79 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 B9A039 149 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 UBXN8O00124 270 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 PLOD3O60568 738 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 CLDN9O95484 217 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 ESRRBO95718 433 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 CTAGE8P0CG41 777 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 IFNGR1P15260 489 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 ENPP1P22413 925 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 SERPINF1P36955 418 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 ARL1P40616 181 aaPredicted RBP12.02□□□□□ -0.49
SMG1-213ENST00000567737 IDH3GP51553 393 aaPredicted RBP12.02□□□□□ -0.49
SMG1-213ENST00000567737 RASGEF1BQ0VAM2 473 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 FBLN7Q53RD9 439 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 FBXW9Q5XUX1 488 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 OR7E24Q6IFN5 339 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 CCDC137Q6PK04 289 aaKnown RBP12.02□□□□□ -0.49
SMG1-213ENST00000567737 APOOLQ6UXV4 268 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 COMMD6Q7Z4G1 85 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 SPATA19Q7Z5L4 167 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 CTAGE4Q8IX94 777 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 SAMD14Q8IZD0 417 aaPredicted RBP12.02□□□□□ -0.49
SMG1-213ENST00000567737 METTL4Q8N3J2 472 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 ZDHHC22Q8N966 263 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 POC1BQ8TC44 478 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 ACTRT2Q8TDY3 377 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 LRRC37BQ96QE4 947 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 TRIM5Q9C035 493 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 LPAR2Q9HBW0 351 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 ESM1Q9NQ30 184 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 NSMCE4AQ9NXX6 385 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 GUCA1BQ9UMX6 200 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 RNF11Q9Y3C5 154 aa12.02□□□□□ -0.49
SMG1-213ENST00000567737 KMT2CQ8NEZ4 4911 aaKnown RBP12.01□□□□□ -0.49
SMG1-213ENST00000567737 C9JVG2 144 aa12.01□□□□□ -0.49
SMG1-213ENST00000567737 MSMBP08118 114 aa12.01□□□□□ -0.49
SMG1-213ENST00000567737 STMN1P16949 149 aa12.01□□□□□ -0.49
SMG1-213ENST00000567737 ELK4P28324 431 aa12.01□□□□□ -0.49
SMG1-213ENST00000567737 EIF1P41567 113 aaKnown RBP12.01□□□□□ -0.49
SMG1-213ENST00000567737 PPOXP50336 477 aa12.01□□□□□ -0.49
SMG1-213ENST00000567737 FRG1Q14331 258 aaKnown RBP12.01□□□□□ -0.49
SMG1-213ENST00000567737 GRAMD1BQ3KR37 738 aa12.01□□□□□ -0.49
SMG1-213ENST00000567737 STEAP4Q687X5 459 aa12.01□□□□□ -0.49
SMG1-213ENST00000567737 TTC19Q6DKK2 380 aaPredicted RBP12.01□□□□□ -0.49
SMG1-213ENST00000567737 FAHD2BQ6P2I3 314 aaPredicted RBP12.01□□□□□ -0.49
SMG1-213ENST00000567737 GALNT5Q7Z7M9 940 aa12.01□□□□□ -0.49
SMG1-213ENST00000567737 FAM9CQ8IZT9 166 aa12.01□□□□□ -0.49
SMG1-213ENST00000567737 ZNF786Q8N393 782 aa12.01□□□□□ -0.49
SMG1-213ENST00000567737 BPIFB2Q8N4F0 458 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms