RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 H7C1Q1 480 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 PIP5K1BO14986 540 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 NPHS1O60500 1241 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 SOX30O94993 753 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 NUDT14O95848 222 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 HMGN2P05204 90 aaKnown RBP10.68□□□□□ -0.7
UBR1-206ENST00000566493 TUBBP07437 444 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 KRT16P08779 473 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 NR1H2P55055 460 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 LASP1Q14847 261 aaKnown RBP10.68□□□□□ -0.7
UBR1-206ENST00000566493 CTU2Q2VPK5 515 aaKnown RBP10.68□□□□□ -0.7
UBR1-206ENST00000566493 SPDYE7PQ495Y7 208 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 TMEM201Q5SNT2 666 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 CCNJQ5T5M9 372 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 MTERF4Q7Z6M4 381 aaKnown RBP10.68□□□□□ -0.7
UBR1-206ENST00000566493 ZAR1Q86SH2 424 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 TRABD2AQ86V40 505 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 NATD1Q8N6N6 113 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 ADAMTS15Q8TE58 950 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 OSTF1Q92882 214 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 CDS1Q92903 461 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 FAM120BQ96EK7 910 aaKnown RBP10.68□□□□□ -0.7
UBR1-206ENST00000566493 OTUB1Q96FW1 271 aaPredicted RBP10.68□□□□□ -0.7
UBR1-206ENST00000566493 APOPT1Q96IL0 206 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 ADGRG7Q96K78 797 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 MARK4Q96L34 752 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 KLHL15Q96M94 604 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 PRPF18Q99633 342 aaKnown RBP10.68□□□□□ -0.7
UBR1-206ENST00000566493 PIGUQ9H490 435 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 C12orf49Q9H741 205 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 DUSP22Q9NRW4 184 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 ATAD3AQ9NVI7 634 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 FBXO34Q9NWN3 711 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 ATP6V1HQ9UI12 483 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 FAF1Q9UNN5 650 aaPredicted RBP10.68□□□□□ -0.7
UBR1-206ENST00000566493 DSCAMO60469 2012 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 HEATR5AQ86XA9 2040 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 A0A0J9YW62 118 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.67□□□□□ -0.7
UBR1-206ENST00000566493 TMEM233B4DJY2 109 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 GTPBP1O00178 669 aaKnown RBP10.67□□□□□ -0.7
UBR1-206ENST00000566493 SMAD7O15105 426 aaKnown RBP10.67□□□□□ -0.7
UBR1-206ENST00000566493 SCAMP2O15127 329 aaKnown RBP10.67□□□□□ -0.7
UBR1-206ENST00000566493 PEX11AO75192 247 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 LY6G6DO95868 133 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 THBDP07204 575 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 CHRNGP07510 517 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 PSMA4P25789 261 aaKnown RBP10.67□□□□□ -0.7
UBR1-206ENST00000566493 ALDH3A1P30838 453 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 SFTPDP35247 375 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 CCT3P49368 545 aaKnown RBP10.67□□□□□ -0.7
UBR1-206ENST00000566493 TP53BP2Q13625 1128 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 LSM12Q3MHD2 195 aaKnown RBP10.67□□□□□ -0.7
UBR1-206ENST00000566493 ATP6AP1LQ52LC2 224 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 ARL13AQ5H913 290 aaPredicted RBP10.67□□□□□ -0.7
UBR1-206ENST00000566493 CDC73Q6P1J9 531 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 STAC2Q6ZMT1 411 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 ZNF704Q6ZNC4 412 aaPredicted RBP10.67□□□□□ -0.7
UBR1-206ENST00000566493 C22orf34Q6ZV56 151 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 WFDC8Q8IUA0 241 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 OR7A2PQ8NGA2 310 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 OR56A1Q8NGH5 318 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 POC1BQ8TC44 478 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 AGR3Q8TD06 166 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 TMEM171Q8WVE6 324 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.67□□□□□ -0.7
UBR1-206ENST00000566493 OR5P2Q8WZ92 322 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 COX4I2Q96KJ9 171 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 NPAS1Q99742 590 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 REPIN1Q9BWE0 567 aaKnown RBP10.67□□□□□ -0.7
UBR1-206ENST00000566493 HDHD5Q9BXW7 423 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 ACTRT3Q9BYD9 372 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 ACTR6Q9GZN1 396 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 GIN1Q9NXP7 522 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 GPR52Q9Y2T5 361 aa10.67□□□□□ -0.7
UBR1-206ENST00000566493 CFLARO15519 480 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 KLF4O43474 513 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 LYPLA1O75608 230 aaPredicted RBP10.66□□□□□ -0.7
UBR1-206ENST00000566493 LINGO3P0C6S8 592 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 LAMP1P11279 417 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 LOXP28300 417 aaPredicted RBP10.66□□□□□ -0.7
UBR1-206ENST00000566493 ELK4P28324 431 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 ADH6P28332 368 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 AGTR1P30556 359 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 PTH2RP49190 550 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 P2RX1P51575 399 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 ZNF117Q03924 483 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 RNPS1Q15287 305 aaKnown RBP10.66□□□□□ -0.7
UBR1-206ENST00000566493 CD226Q15762 336 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 UGT3A2Q3SY77 523 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 EXOSC6Q5RKV6 272 aaKnown RBP10.66□□□□□ -0.7
UBR1-206ENST00000566493 ALKBH2Q6NS38 261 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 RIBC1Q8N443 379 aaPredicted RBP10.66□□□□□ -0.7
UBR1-206ENST00000566493 BANPQ8N9N5 519 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 LRRN4CLQ8ND94 238 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 STEAP2Q8NFT2 490 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 NUDT8Q8WV74 236 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 ROBO4Q8WZ75 1007 aa10.66□□□□□ -0.7
UBR1-206ENST00000566493 CPNE4Q96A23 557 aaPredicted RBP10.66□□□□□ -0.7
UBR1-206ENST00000566493 ARL8AQ96BM9 186 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms