RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 PHOSPHO1Q8TCT1 267 aa18.09■□□□□ 0.49
CLN6-207ENST00000566347 ASIC5Q9NY37 505 aa18.09■□□□□ 0.49
CLN6-207ENST00000566347 NOP53Q9NZM5 478 aaKnown RBP18.09■□□□□ 0.49
CLN6-207ENST00000566347 FLNAP21333 2647 aaKnown RBP18.08■□□□□ 0.49
CLN6-207ENST00000566347 A0A1W2PPR1 153 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 SS18L1O75177 396 aaPredicted RBP18.08■□□□□ 0.48
CLN6-207ENST00000566347 SNUPNO95149 360 aaKnown RBP18.08■□□□□ 0.48
CLN6-207ENST00000566347 LINGO3P0C6S8 592 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 G6PDP11413 515 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 CRYGSP22914 178 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 ELK4P28324 431 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 CCKARP32238 428 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 SLC6A8P48029 635 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 SUMO3P55854 103 aaPredicted RBP18.08■□□□□ 0.48
CLN6-207ENST00000566347 CLDN8P56748 225 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 ADAM8P78325 824 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 ZNF117Q03924 483 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 KLHL26Q53HC5 615 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 NPAS1Q99742 590 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 SSU72Q9NP77 194 aaKnown RBP18.08■□□□□ 0.48
CLN6-207ENST00000566347 FANCFQ9NPI8 374 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 PLSCR4Q9NRQ2 329 aa18.08■□□□□ 0.48
CLN6-207ENST00000566347 BEX4Q9NWD9 120 aaPredicted RBP18.08■□□□□ 0.48
CLN6-207ENST00000566347 C6orf203Q9P0P8 240 aaPredicted RBP18.08■□□□□ 0.48
CLN6-207ENST00000566347 TNFSF11O14788 317 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 BIRC5O15392 142 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 RGS16O15492 202 aaPredicted RBP18.07■□□□□ 0.48
CLN6-207ENST00000566347 CXCL13O43927 109 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 SERPINE1P05121 402 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 CD53P19397 219 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 IL11P20809 199 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 ADH6P28332 368 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 P2RX1P51575 399 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 ATP12AP54707 1039 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 FOXD4Q12950 439 aaPredicted RBP18.07■□□□□ 0.48
CLN6-207ENST00000566347 HBMQ6B0K9 141 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 GTF2IRD2BQ6EKJ0 949 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 GTF2IRD2Q86UP8 949 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 LILRA2Q8N149 483 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 POC1BQ8TC44 478 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 PKNOX2Q96KN3 472 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 KLHL15Q96M94 604 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 TMEM185BQ9H7F4 350 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 TIGARQ9NQ88 270 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 ACTL7BQ9Y614 415 aa18.07■□□□□ 0.48
CLN6-207ENST00000566347 ZNF469Q96JG9 3925 aaPredicted RBP18.07■□□□□ 0.48
CLN6-207ENST00000566347 A0A0J9YW62 118 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 GJE1A6NN92 205 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 DEFB108AA8MXU0 73 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 TM9SF1O15321 606 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 NUDT14O95848 222 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 OPN1LWP04000 364 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 MYZAPP0CAP1 466 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 PABPC4LP0CB38 370 aaKnown RBP18.06■□□□□ 0.48
CLN6-207ENST00000566347 FOSL1P15407 271 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 SOAT1P35610 550 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 ABCE1P61221 599 aaKnown RBP18.06■□□□□ 0.48
CLN6-207ENST00000566347 HBA1P69905 142 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 ZNF844Q08AG5 666 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 CHI3L2Q15782 390 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 PDCD2Q16342 344 aaPredicted RBP18.06■□□□□ 0.48
CLN6-207ENST00000566347 PGS1Q32NB8 556 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 KIRREL3Q8IZU9 778 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 OR5AK3PQ8NH89 298 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 NUDT8Q8WV74 236 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 OR7D2Q96RA2 312 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 KLHL4Q9C0H6 718 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 ICAM5Q9UMF0 924 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 CLEC4AQ9UMR7 237 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.06■□□□□ 0.48
CLN6-207ENST00000566347 DTNAQ9Y4J8 743 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 GPC6Q9Y625 555 aaPredicted RBP18.06■□□□□ 0.48
CLN6-207ENST00000566347 KCNE3Q9Y6H6 103 aa18.06■□□□□ 0.48
CLN6-207ENST00000566347 NPIPA5A0A0B4J1W7 369 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 WDR91A4D1P6 747 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 DUXAA6NLW8 204 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 NPIPA7E9PJI5 369 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 NPIPB9F8W1W9 429 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 GTPBP1O00178 669 aaKnown RBP18.05■□□□□ 0.48
CLN6-207ENST00000566347 SIAH2O43255 324 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 ITM2AO43736 263 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 AK1P00568 194 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 NPIPA8P0DM63 369 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 PPP3CBP16298 524 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 CARD18P57730 90 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 FOXF1Q12946 379 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 EXOC3L2Q2M3D2 409 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.05■□□□□ 0.48
CLN6-207ENST00000566347 ZNF550Q7Z398 422 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 STK32CQ86UX6 486 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 ZNF781Q8N8C0 355 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 OSTF1Q92882 214 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 PIK3IP1Q96FE7 263 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 REXO5Q96IC2 774 aaKnown RBP18.05■□□□□ 0.48
CLN6-207ENST00000566347 KLHDC3Q9BQ90 382 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.05■□□□□ 0.48
CLN6-207ENST00000566347 CARD8Q9Y2G2 431 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 RAP2CQ9Y3L5 183 aa18.05■□□□□ 0.48
CLN6-207ENST00000566347 V9GYY5 206 aaPredicted RBP18.05■□□□□ 0.48
CLN6-207ENST00000566347 RNASET2O00584 256 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms