RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 EMBQ6PCB8 327 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 CBLN3Q6UW01 205 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 ESPNLQ6ZVH7 1005 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 OR56A1Q8NGH5 318 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 OR6K3Q8NGY3 331 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 PHOSPHO1Q8TCT1 267 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 ADAMTS15Q8TE58 950 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 CAVIN3Q969G5 261 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 TUBGCP3Q96CW5 907 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 PIK3IP1Q96FE7 263 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 ZC3HAV1LQ96H79 300 aaKnown RBP16.4■□□□□ 0.22
USB1-213ENST00000566292 GMPPAQ96IJ6 420 aaPredicted RBP16.4■□□□□ 0.22
USB1-213ENST00000566292 PKNOX2Q96KN3 472 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 TMEM109Q9BVC6 243 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 GSX1Q9H4S2 264 aaPredicted RBP16.4■□□□□ 0.22
USB1-213ENST00000566292 NEUROD4Q9HD90 331 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 ATAD3AQ9NVI7 634 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 BEX4Q9NWD9 120 aaPredicted RBP16.4■□□□□ 0.22
USB1-213ENST00000566292 PAQR5Q9NXK6 330 aaPredicted RBP16.4■□□□□ 0.22
USB1-213ENST00000566292 EMC9Q9Y3B6 208 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 ROS1P08922 2347 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 FREM1Q5H8C1 2179 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 ITM2AO43736 263 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 EFNA2O43921 213 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 G6PDP11413 515 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 PRPS1L1P21108 318 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 ATP6V1C1P21283 382 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 LOXP28300 417 aaPredicted RBP16.39■□□□□ 0.21
USB1-213ENST00000566292 SHC1P29353 583 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 FOXF1Q12946 379 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 EXOC3L2Q2M3D2 409 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 LSM12Q3MHD2 195 aaKnown RBP16.39■□□□□ 0.21
USB1-213ENST00000566292 SPDYE7PQ495Y7 208 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 KLHL26Q53HC5 615 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 ANKRD34AQ69YU3 496 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 HBMQ6B0K9 141 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 MTERF4Q7Z6M4 381 aaKnown RBP16.39■□□□□ 0.21
USB1-213ENST00000566292 NATD1Q8N6N6 113 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 OR5AK3PQ8NH89 298 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 SFXN5Q8TD22 340 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 POM121Q96HA1 1249 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 HS3ST6Q96QI5 342 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 KLHL4Q9C0H6 718 aa16.39■□□□□ 0.21
USB1-213ENST00000566292 BHLHE41Q9C0J9 482 aaPredicted RBP16.39■□□□□ 0.21
USB1-213ENST00000566292 ZNF395Q9H8N7 513 aaPredicted RBP16.39■□□□□ 0.21
USB1-213ENST00000566292 MCTS1Q9ULC4 181 aaKnown RBP16.39■□□□□ 0.21
USB1-213ENST00000566292 FAF1Q9UNN5 650 aaPredicted RBP16.39■□□□□ 0.21
USB1-213ENST00000566292 NPIPB9F8W1W9 429 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 SYNGR4O95473 234 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 PLGP00747 810 aaPredicted RBP16.38■□□□□ 0.21
USB1-213ENST00000566292 NID1P14543 1247 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 FOSL1P15407 271 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 ME2P23368 584 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 CTBP2P56545 445 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 HBA1P69905 142 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 WDR93Q6P2C0 686 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 NUDCD3Q8IVD9 361 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 LILRA2Q8N149 483 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 OSTF1Q92882 214 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 KLHL15Q96M94 604 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 OR7D2Q96RA2 312 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 PRPF18Q99633 342 aaKnown RBP16.38■□□□□ 0.21
USB1-213ENST00000566292 DUSP26Q9BV47 211 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 ICAM5Q9UMF0 924 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 CARD8Q9Y2G2 431 aa16.38■□□□□ 0.21
USB1-213ENST00000566292 NAV3Q8IVL0 2385 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 CFLARO15519 480 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 THBDP07204 575 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 KRT16P08779 473 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 SFTPDP35247 375 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 EIF1P41567 113 aaKnown RBP16.37■□□□□ 0.21
USB1-213ENST00000566292 P2RX1P51575 399 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 ATP12AP54707 1039 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 CLDN8P56748 225 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 C21orf58P58505 322 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 EMX2Q04743 252 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 TOMM34Q15785 309 aaPredicted RBP16.37■□□□□ 0.21
USB1-213ENST00000566292 NDUFAF6Q330K2 333 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 STAC2Q6ZMT1 411 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 ZNF781Q8N8C0 355 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 ZNF527Q8NB42 609 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 OR5D16Q8NGK9 328 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 FBXO27Q8NI29 283 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 GPR119Q8TDV5 335 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 MOAP1Q96BY2 351 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 ZNF524Q96C55 264 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 HOXD1Q9GZZ0 328 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 SERHL2Q9H4I8 314 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 GLRX2Q9NS18 164 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 ASIC5Q9NY37 505 aa16.37■□□□□ 0.21
USB1-213ENST00000566292 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.37■□□□□ 0.21
USB1-213ENST00000566292 V9GYY5 206 aaPredicted RBP16.37■□□□□ 0.21
USB1-213ENST00000566292 UQCRHLA0A096LP55 91 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 WDR91A4D1P6 747 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 NUDT14O95848 222 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 ELK4P28324 431 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 AGTR1P30556 359 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 SOAT1P35610 550 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 SUMO3P55854 103 aaPredicted RBP16.36■□□□□ 0.21
USB1-213ENST00000566292 CARD18P57730 90 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms