RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 ACBD3Q9H3P7 528 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 SSU72Q9NP77 194 aaKnown RBP13.18□□□□□ -0.3
USB1-210ENST00000565151 KLHL28Q9NXS3 571 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 C6orf203Q9P0P8 240 aaPredicted RBP13.18□□□□□ -0.3
USB1-210ENST00000565151 HAO1Q9UJM8 370 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 CARD8Q9Y2G2 431 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 ARID1AO14497 2285 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 A0A087WZY1 265 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 TNFSF11O14788 317 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 BIRC5O15392 142 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 FCMRO60667 390 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 BCAS1O75363 584 aaPredicted RBP13.17□□□□□ -0.3
USB1-210ENST00000565151 HSPA4LO95757 839 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 CD1EP15812 388 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 LCN1P31025 176 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 RPL3P39023 403 aaKnown RBP13.17□□□□□ -0.3
USB1-210ENST00000565151 CD79BP40259 229 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 EIF1AXP47813 144 aaKnown RBP13.17□□□□□ -0.3
USB1-210ENST00000565151 SLC1A6P48664 564 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 OCRLQ01968 901 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 FOXF1Q12946 379 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 PGS1Q32NB8 556 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 CEP85LQ5SZL2 805 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 OR2A2Q6IF42 318 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 CHMP1BQ7LBR1 199 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 ZNF550Q7Z398 422 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 B4GALNT2Q8NHY0 566 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 SFXN5Q8TD22 340 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 MBD6Q96DN6 1003 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 DTNBP1Q96EV8 351 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 RAP2CQ9Y3L5 183 aa13.17□□□□□ -0.3
USB1-210ENST00000565151 PRAMEF27A3QJZ7 478 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 SCDO00767 359 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 NTN1O95631 604 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 THBDP07204 575 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 ALDOCP09972 364 aaKnown RBP13.16□□□□□ -0.3
USB1-210ENST00000565151 CD8BP10966 210 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 KLK2P20151 261 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 UGT2B10P36537 528 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 PCYT1AP49585 367 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 EEFSECP57772 596 aaKnown RBP13.16□□□□□ -0.3
USB1-210ENST00000565151 RAC1P63000 192 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 EEF1A1P68104 462 aaKnown RBP13.16□□□□□ -0.3
USB1-210ENST00000565151 PLAURQ03405 335 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 FUT5Q11128 374 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 MAPK14Q16539 360 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 EEF1A1P5Q5VTE0 462 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 ANKRD34AQ69YU3 496 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 FAM214BQ7L5A3 538 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 C6orf120Q7Z4R8 191 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 ANKRD46Q86W74 232 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 TGIF2LYQ8IUE0 185 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 OR56A1Q8NGH5 318 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 PHOSPHO1Q8TCT1 267 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 GPR119Q8TDV5 335 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 ADAMTS15Q8TE58 950 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 ZBTB8AQ96BR9 441 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 HS3ST6Q96QI5 342 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 SRXN1Q9BYN0 137 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 NUF2Q9BZD4 464 aa13.16□□□□□ -0.3
USB1-210ENST00000565151 NOP53Q9NZM5 478 aaKnown RBP13.16□□□□□ -0.3
USB1-210ENST00000565151 EIF3LQ9Y262 564 aaKnown RBP13.16□□□□□ -0.3
USB1-210ENST00000565151 C9JVG2 144 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 TM9SF1O15321 606 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 CFLARO15519 480 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 CD53P19397 219 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 IL12AP29459 219 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 RPL14P50914 215 aaKnown RBP13.15□□□□□ -0.3
USB1-210ENST00000565151 ATP12AP54707 1039 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 ADAM8P78325 824 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 BST1Q10588 318 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 FOXD4Q12950 439 aaPredicted RBP13.15□□□□□ -0.3
USB1-210ENST00000565151 SGCBQ16585 318 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 SMU1Q2TAY7 513 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 LSM12Q3MHD2 195 aaKnown RBP13.15□□□□□ -0.3
USB1-210ENST00000565151 CXorf67Q86X51 503 aaPredicted RBP13.15□□□□□ -0.3
USB1-210ENST00000565151 WDR75Q8IWA0 830 aaKnown RBP13.15□□□□□ -0.3
USB1-210ENST00000565151 LILRA2Q8N149 483 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 CHDHQ8NE62 594 aaPredicted RBP13.15□□□□□ -0.3
USB1-210ENST00000565151 OR8J2Q8NGG1 315 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 OR2V1Q8NHB1 315 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 FBXO27Q8NI29 283 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 ROBO4Q8WZ75 1007 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 CHMP6Q96FZ7 201 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 COQ10BQ9H8M1 238 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 DLL4Q9NR61 685 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 PLSCR4Q9NRQ2 329 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 ATAD3AQ9NVI7 634 aa13.15□□□□□ -0.3
USB1-210ENST00000565151 FAF1Q9UNN5 650 aaPredicted RBP13.15□□□□□ -0.3
USB1-210ENST00000565151 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.15□□□□□ -0.3
USB1-210ENST00000565151 RNF103-CHMP3A0A140T963 221 aa13.14□□□□□ -0.31
USB1-210ENST00000565151 RNASET2O00584 256 aaKnown RBP13.14□□□□□ -0.31
USB1-210ENST00000565151 SDHDO14521 159 aa13.14□□□□□ -0.31
USB1-210ENST00000565151 DNAJA2O60884 412 aa13.14□□□□□ -0.31
USB1-210ENST00000565151 SS18L1O75177 396 aaPredicted RBP13.14□□□□□ -0.31
USB1-210ENST00000565151 RAF1P04049 648 aa13.14□□□□□ -0.31
USB1-210ENST00000565151 POU2F1P14859 743 aa13.14□□□□□ -0.31
USB1-210ENST00000565151 PRKCAP17252 672 aa13.14□□□□□ -0.31
USB1-210ENST00000565151 MATN1P21941 496 aa13.14□□□□□ -0.31
USB1-210ENST00000565151 DNASE1P24855 282 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms