RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 NPAS1Q99742 590 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 TM9SF2Q99805 663 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 KLHDC3Q9BQ90 382 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 PIGQQ9BRB3 760 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 GPATCH1Q9BRR8 931 aaKnown RBP12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 PIGUQ9H490 435 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 KCNN3Q9UGI6 736 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 RNF103-CHMP3A0A140T963 221 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 SLC22A20A6NK97 555 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 EIF1AYO14602 144 aaKnown RBP12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 HCRTR2O43614 444 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 SMNDC1O75940 238 aaKnown RBP eCLIP12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 RCBTB2O95199 551 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 NUDT14O95848 222 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 PGRP06401 933 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 MATN1P21941 496 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 CPOXP36551 454 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 CLDN15P56746 228 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 IRX1P78414 480 aaPredicted RBP12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 SGCBQ16585 318 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 NDUFAF6Q330K2 333 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 FLYWCH1Q4VC44 716 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 C6orf120Q7Z4R8 191 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 MIER2Q8N344 545 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 VPS37AQ8NEZ2 397 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 MOAP1Q96BY2 351 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 THOC1Q96FV9 657 aaKnown RBP12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 SLC35G5Q96KT7 338 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 STACQ99469 402 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 ZBTB18Q99592 522 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 RBM24Q9BX46 236 aaKnown RBP12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 TMEM185BQ9H7F4 350 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 NPHS2Q9NP85 383 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 UBQLN4Q9NRR5 601 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 DUSP22Q9NRW4 184 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 GPATCH2Q9NW75 528 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 BTNL2Q9UIR0 455 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 DCTN4Q9UJW0 460 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 PCDHGB4Q9UN71 923 aa12.29□□□□□ -0.44
VPS9D1-204ENST00000565023 OIP5O43482 229 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 KRT16P08779 473 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 EIF1AXP47813 144 aaKnown RBP12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 ZNF41P51814 821 aaPredicted RBP12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 LRRC74AQ0VAA2 488 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 GPR68Q15743 365 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 BCL2A1Q16548 175 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 KRTAP21-3Q3LHN1 58 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 FBXW10Q5XX13 1052 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 ADGRE4PQ86SQ3 457 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 TMCO5AQ8N6Q1 288 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 OR9I1Q8NGQ6 314 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 GOT1L1Q8NHS2 421 aaPredicted RBP12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 B4GALNT2Q8NHY0 566 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 FNDC9Q8TBE3 224 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 RNF145Q96MT1 663 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 CCDC115Q96NT0 180 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 OR52E6Q96RD3 313 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 SFXN3Q9BWM7 321 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 PRRG4Q9BZD6 226 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 SERHL2Q9H4I8 314 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 SLC24A3Q9HC58 644 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 FGFR1OP2Q9NVK5 253 aa12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 DNAJB12Q9NXW2 375 aaKnown RBP12.28□□□□□ -0.44
VPS9D1-204ENST00000565023 HEATR5AQ86XA9 2040 aa12.27□□□□□ -0.44
VPS9D1-204ENST00000565023 IGLV3-32A0A0A0MS00 114 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 A0A1W2PNV4 684 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 TUBAL3A6NHL2 446 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 GTPBP1O00178 669 aaKnown RBP12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 CYP7B1O75881 506 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 IL18BPO95998 194 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 IL6P05231 212 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 VIMP08670 466 aaKnown RBP12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 TROVE2P10155 538 aaKnown RBP eCLIP12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 CAPN3P20807 821 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 ATP4BP51164 291 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 CCR4P51679 360 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 POLR2JP52435 117 aaKnown RBP12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 EEFSECP57772 596 aaKnown RBP12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 RPS3AP61247 264 aaKnown RBP12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 STX1BP61266 288 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 ZNF117Q03924 483 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 PON3Q15166 354 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 CGB2Q6NT52 195 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 TNFAIP8L2Q6P589 184 aaPredicted RBP12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 VWA1Q6PCB0 445 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 BHLHB9Q6PI77 547 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 ATP6V1C2Q8NEY4 427 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 RAB8BQ92930 207 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 ARSGQ96EG1 525 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 ZFP3Q96NJ6 502 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 ZNF317Q96PQ6 595 aaPredicted RBP12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 POLDIP3Q9BY77 421 aaKnown RBP12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 OR51I1Q9H343 314 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 MED17Q9NVC6 651 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 TMEM45AQ9NWC5 275 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 GALNT8Q9NY28 637 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 CLEC4AQ9UMR7 237 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 CARD8Q9Y2G2 431 aa12.27□□□□□ -0.45
VPS9D1-204ENST00000565023 NAV3Q8IVL0 2385 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 A0A0G2JND7 137 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms