RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ZNF621Q6ZSS3 439 aa16.55■□□□□ 0.24
SYNGR3-204ENST00000564642 MAVSQ7Z434 540 aa16.55■□□□□ 0.24
SYNGR3-204ENST00000564642 NEURL3Q96EH8 262 aa16.55■□□□□ 0.24
SYNGR3-204ENST00000564642 OR52B2Q96RD2 323 aa16.55■□□□□ 0.24
SYNGR3-204ENST00000564642 INTS9Q9NV88 658 aaKnown RBP16.55■□□□□ 0.24
SYNGR3-204ENST00000564642 FOXD3Q9UJU5 478 aaPredicted RBP16.55■□□□□ 0.24
SYNGR3-204ENST00000564642 MKLN1Q9UL63 735 aa16.55■□□□□ 0.24
SYNGR3-204ENST00000564642 CARD8Q9Y2G2 431 aa16.55■□□□□ 0.24
SYNGR3-204ENST00000564642 MED12LQ86YW9 2145 aa16.55■□□□□ 0.24
SYNGR3-204ENST00000564642 SLC22A20A6NK97 555 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 EEF1E1-BLOC1S5C9J1V9 151 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 EEF1E1O43324 174 aaKnown RBP16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 TGDSO95455 350 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 PEX19P40855 299 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 RNF144AP50876 292 aaPredicted RBP16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 P2RX1P51575 399 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 DLX5P56178 289 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 CLDN20P56880 219 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 PPP2R2AP63151 447 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 ZNF117Q03924 483 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 TLE4Q04727 773 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 MYBPHQ13203 477 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 SGCBQ16585 318 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 PLPPR5Q32ZL2 321 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 EPGNQ6UW88 154 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 GCNT2Q8N0V5 402 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 GTPBP8Q8N3Z3 284 aaPredicted RBP16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 RAB8BQ92930 207 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 RNASE6Q93091 150 aaKnown RBP16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 ZNF559Q9BR84 538 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 INPP5KQ9BT40 448 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 SFXN3Q9BWM7 321 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 PINK1Q9BXM7 581 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 NMUR2Q9GZQ4 415 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 SLCO1B3Q9NPD5 702 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 ZIM2Q9NZV7 527 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 KCNN3Q9UGI6 736 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 ITPR2Q14571 2701 aa16.54■□□□□ 0.24
SYNGR3-204ENST00000564642 C7orf72A4D263 438 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 NPIPB9F8W1W9 429 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 H0YC42 278 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 RFXANKO14593 260 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 FCMRO60667 390 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 TGM6O95932 706 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 EIF1P41567 113 aaKnown RBP16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 ANXA11P50995 505 aaKnown RBP16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 TPD52P55327 224 aaPredicted RBP16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 SUMO3P55854 103 aaPredicted RBP16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 CLDN15P56746 228 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 FOXF2Q12947 444 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 FBXL19-AS1Q494R0 122 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 PDZK1Q5T2W1 519 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 OR2A2Q6IF42 318 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 HEPHL1Q6MZM0 1159 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 CBLN3Q6UW01 205 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 MIER2Q8N344 545 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 TMCO5AQ8N6Q1 288 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 RFWD2Q8NHY2 731 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 RNF145Q96MT1 663 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 RMND5AQ9H871 391 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 SDR39U1Q9NRG7 319 aaPredicted RBP16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 WDR45Q9Y484 360 aa16.53■□□□□ 0.24
SYNGR3-204ENST00000564642 EIF1AYO14602 144 aaKnown RBP16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 POLR3GO15318 223 aaPredicted RBP16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 ZNF264O43296 627 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 EIF4E2O60573 245 aaKnown RBP16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 ANP32DO95626 131 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 GSNP06396 782 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 UBL4AP11441 157 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 ME2P23368 584 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 CDKN2CP42773 168 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 POLR2JP52435 117 aaKnown RBP16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 STX1BP61266 288 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 RAC1P63000 192 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 TXNL4AP83876 142 aaKnown RBP16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 HPCAP84074 193 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 SNTB1Q13884 538 aaKnown RBP16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 PON3Q15166 354 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 ZNF141Q15928 474 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 GPAT3Q53EU6 434 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 RNF130Q86XS8 419 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 METTL25Q8N6Q8 603 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 TOR1AIP2Q8NFQ8 470 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 ROPN1LQ96C74 230 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 NPAS1Q99742 590 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 ZNF350Q9GZX5 532 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 PIGMQ9H3S5 423 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 MCCC2Q9HCC0 563 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 POLE3Q9NRF9 147 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 ICAM5Q9UMF0 924 aa16.52■□□□□ 0.24
SYNGR3-204ENST00000564642 SERINC4A6NH21 518 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 OIP5O43482 229 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 UGT2B17O75795 530 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 CYP7B1O75881 506 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 OPN1LWP04000 364 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 CRHP06850 196 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 GUSBP08236 651 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 LINGO3P0C6S8 592 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 KIR2DL3P43628 341 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms