RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ZNF517Q6ZMY9 492 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-210ENST00000564587 SHISA6Q6ZSJ9 500 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 P3H2Q8IVL5 708 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 CDK20Q8IZL9 346 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 WDR36Q8NI36 951 aaKnown RBP14.33□□□□□ -0.12
COMMD4-210ENST00000564587 FAM81AQ8TBF8 368 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 DNAJA4Q8WW22 397 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-210ENST00000564587 IPCEF1Q8WWN9 437 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-210ENST00000564587 DEPDC7Q96QD5 511 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 TEX12Q9BXU0 123 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 PRRG3Q9BZD7 231 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 CTPS2Q9NRF8 586 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 RPS6KB2Q9UBS0 482 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 SLC7A7Q9UM01 511 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 LOC102723996A0A087X1L8 192 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 H3BN98 237 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 AGRPO00253 132 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 SLC1A7O00341 560 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 CHP2O43745 196 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 TSPAN2O60636 221 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 UTS2O95399 124 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 GKN3PP0CG01 181 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 FUT4P22083 530 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 HTR2AP28223 471 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 EPHA2P29317 976 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 TTKP33981 857 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 ACAA2P42765 397 aaKnown RBP14.32□□□□□ -0.12
COMMD4-210ENST00000564587 HOXC5Q00444 222 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 INSM1Q01101 510 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-210ENST00000564587 SPEM2Q0P670 501 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 FOXD4Q12950 439 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-210ENST00000564587 EFR3AQ14156 821 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 ISXQ2M1V0 245 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 CTU2Q2VPK5 515 aaKnown RBP14.32□□□□□ -0.12
COMMD4-210ENST00000564587 SLX4IPQ5VYV7 408 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 ULK3Q6PHR2 472 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 RASSF6Q6ZTQ3 369 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 RAB11FIP2Q7L804 512 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 CLDN22Q8N7P3 220 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 FAM71CQ8NEG0 241 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 OR4C3Q8NH37 302 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 RHOXF1Q8NHV9 184 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 EFHD2Q96C19 240 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-210ENST00000564587 Q96MT0 163 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 FAM117AQ9C073 453 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 HHATLQ9HCP6 504 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 PLCXD1Q9NUJ7 323 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 NCDNQ9UBB6 729 aa14.32□□□□□ -0.12
COMMD4-210ENST00000564587 CCDC187A0A096LP49 1063 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 A0A0B4J2E0 115 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 A0A1B0GX12 115 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 SH3D21A4FU49 640 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 OR6C70A6NIJ9 312 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 C4orf47A7E2U8 309 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 GTPBP1O00178 669 aaKnown RBP14.31□□□□□ -0.12
COMMD4-210ENST00000564587 ZFAND5O76080 213 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 JMJD7P0C870 316 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 UBL4AP11441 157 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 PRG2P13727 222 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 ZNF28P17035 718 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 OMPP47874 163 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 SLC6A8P48029 635 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 IDH2P48735 452 aaKnown RBP14.31□□□□□ -0.12
COMMD4-210ENST00000564587 NCF4Q15080 339 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 TMEM164Q5U3C3 297 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 FNDC7Q5VTL7 733 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 RPL13AP3Q6NVV1 102 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 FAM198BQ6UWH4 519 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 CASP12Q6UXS9 341 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 SLCO6A1Q86UG4 719 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 NKAIN4Q8IVV8 208 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 ENTHD1Q8IYW4 607 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 APCDD1LQ8NCL9 501 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 TEX47Q8TBZ9 253 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 TMEM239Q8WW34 195 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 OSTF1Q92882 214 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 OMA1Q96E52 524 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 PRSS27Q9BQR3 290 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 PRR14Q9BWN1 585 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 LAT2Q9GZY6 243 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 SLC25A19Q9HC21 320 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 PADI1Q9ULC6 663 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 RNF6Q9Y252 685 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 MED31Q9Y3C7 131 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 PCDHGA3Q9Y5H0 932 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 SNX5Q9Y5X3 404 aa14.31□□□□□ -0.12
COMMD4-210ENST00000564587 COL27A1Q8IZC6 1860 aaPredicted RBP14.31□□□□□ -0.12
COMMD4-210ENST00000564587 ZNF318Q5VUA4 2279 aa14.3□□□□□ -0.12
COMMD4-210ENST00000564587 A0A1B0GWA3 101 aa14.3□□□□□ -0.12
COMMD4-210ENST00000564587 ALG1L2C9J202 215 aa14.3□□□□□ -0.12
COMMD4-210ENST00000564587 ZNF264O43296 627 aa14.3□□□□□ -0.12
COMMD4-210ENST00000564587 EIF4E2O60573 245 aaKnown RBP14.3□□□□□ -0.12
COMMD4-210ENST00000564587 CNOT3O75175 753 aaKnown RBP14.3□□□□□ -0.12
COMMD4-210ENST00000564587 MT-CO3P00414 261 aa14.3□□□□□ -0.12
COMMD4-210ENST00000564587 THY1P04216 161 aa14.3□□□□□ -0.12
COMMD4-210ENST00000564587 RAB40ALP0C0E4 278 aa14.3□□□□□ -0.12
COMMD4-210ENST00000564587 POU1F1P28069 291 aa14.3□□□□□ -0.12
COMMD4-210ENST00000564587 ID4P47928 161 aa14.3□□□□□ -0.12
COMMD4-210ENST00000564587 ALDH3B2P48448 385 aa14.3□□□□□ -0.12
COMMD4-210ENST00000564587 SMSP52788 366 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms