RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 BDH2Q9BUT1 245 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 IL1RAPQ9NPH3 570 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 LANCL2Q9NS86 450 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 RXFP3Q9NSD7 469 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 SIDT1Q9NXL6 827 aaKnown RBP16.43■□□□□ 0.22
GDE1-203ENST00000564172 OSGIN1Q9UJX0 560 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 ZNF451Q9Y4E5 1061 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 KCNE3Q9Y6H6 103 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 SNAPINO95295 136 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 IFI6P09912 130 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 MAOAP21397 527 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 GPAT3Q53EU6 434 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 C1orf189Q5VU69 101 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 RHBDD2Q6NTF9 364 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 B3GNT8Q7Z7M8 397 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 SLC7A6Q92536 515 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 FBXW5Q969U6 566 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 OR1F2PQ96R84 312 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 FTSJ1Q9UET6 329 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 RARRES3Q9UL19 164 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 SRPK3Q9UPE1 567 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 PRELID3BQ9Y3B1 194 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 SLC28A2O43868 658 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 NR2F1P10589 423 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 CD59P13987 128 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 ARHGDIBP52566 201 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 KCNJ10P78508 379 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 ZFP36L1Q07352 338 aaKnown RBP16.42■□□□□ 0.22
GDE1-203ENST00000564172 MAP4K2Q12851 820 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 Q3ZCU0 254 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 WDR53Q7Z5U6 358 aaPredicted RBP16.42■□□□□ 0.22
GDE1-203ENST00000564172 RAB43Q86YS6 212 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 ZDHHC21Q8IVQ6 265 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 SLC16A11Q8NCK7 471 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 OR4M2Q8NGB6 313 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 OR4M1Q8NGD0 313 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 NDNFQ8TB73 568 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 TREX2Q9BQ50 279 aaPredicted RBP16.42■□□□□ 0.22
GDE1-203ENST00000564172 ADAP2Q9NPF8 381 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 RALGAPA1Q6GYQ0 2036 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 ZNF99A8MXY4 864 aaPredicted RBP16.42■□□□□ 0.22
GDE1-203ENST00000564172 PPM1BO75688 479 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 PRSS23O95084 383 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 TIAF1O95411 115 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 CLIC3O95833 236 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 CST1P01037 141 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 FBLP22087 321 aaKnown RBP16.42■□□□□ 0.22
GDE1-203ENST00000564172 ACVR2AP27037 513 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 VBP1P61758 197 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 FUT5Q11128 374 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 TRA2AQ13595 282 aaKnown RBP eCLIP16.42■□□□□ 0.22
GDE1-203ENST00000564172 TSC22D1Q15714 1073 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 CDC73Q6P1J9 531 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 UTS2BQ765I0 119 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 MCFD2Q8NI22 146 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 ADAMTS15Q8TE58 950 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 APOL4Q9BPW4 351 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 UCK2Q9BZX2 261 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 GHITMQ9H3K2 345 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 OCIAD1Q9NX40 245 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 DNAJB9Q9UBS3 223 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 MKLN1Q9UL63 735 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 OAZ3Q9UMX2 235 aa16.42■□□□□ 0.22
GDE1-203ENST00000564172 DUXAA6NLW8 204 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 RAB3AP20336 220 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 GP2P55259 537 aaKnown RBP16.41■□□□□ 0.22
GDE1-203ENST00000564172 VLDLRP98155 873 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 PWWP2BQ6NUJ5 590 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 ZNF517Q6ZMY9 492 aaPredicted RBP16.41■□□□□ 0.22
GDE1-203ENST00000564172 VWA5B2Q8N398 1253 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 SLC38A9Q8NBW4 561 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 UFD1Q92890 307 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 RIT1Q92963 219 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 PTP4A1Q93096 173 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 RNF31Q96EP0 1072 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 SLC35A4Q96G79 324 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 ZNF300Q96RE9 604 aaPredicted RBP16.41■□□□□ 0.22
GDE1-203ENST00000564172 SNX5Q9Y5X3 404 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 LINC01387J3KSC0 135 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 S1PR1P21453 382 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 GZMKP49863 264 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 CRISP3P54108 245 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 EXOSC7Q15024 291 aaKnown RBP16.41■□□□□ 0.22
GDE1-203ENST00000564172 ARHGAP40Q5TG30 622 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 GPALPP1Q8IXQ4 340 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 TEX47Q8TBZ9 253 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 DNAJA4Q8WW22 397 aaPredicted RBP16.41■□□□□ 0.22
GDE1-203ENST00000564172 SLC9A6Q92581 669 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 C7orf34Q96L11 122 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 PTCHD1Q96NR3 888 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 DGAT2Q96PD7 388 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 SPOCK3Q9BQ16 436 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 BCL2L10Q9HD36 194 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 APMAPQ9HDC9 416 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 ZNF639Q9UID6 485 aa16.41■□□□□ 0.22
GDE1-203ENST00000564172 I3L521 148 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 ST8SIA5O15466 376 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 SCRG1O75711 98 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 PDE9AO76083 593 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 CBX7O95931 251 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms