RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 SEC14L5O43304 696 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 TNFRSF21O75509 655 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 NUDT14O95848 222 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 NPIPA8P0DM63 369 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 OR12D1P0DN82 309 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 ME2P23368 584 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 MAGEA8P43361 318 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 IRX1P78414 480 aaPredicted RBP17.92■□□□□ 0.46
CMTM3-207ENST00000564060 ZNF117Q03924 483 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 GPR68Q15743 365 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 PLPPR5Q32ZL2 321 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 FBXL19-AS1Q494R0 122 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 TNFAIP8L2Q6P589 184 aaPredicted RBP17.92■□□□□ 0.46
CMTM3-207ENST00000564060 ZNF621Q6ZSS3 439 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 OR5M1Q8NGP8 315 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 XAGE5Q8WWM1 108 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 SMPDL3BQ92485 455 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 MARK4Q96L34 752 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 MAGEB18Q96M61 343 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 SLCO1B3Q9NPD5 702 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 PAQR5Q9NXK6 330 aaPredicted RBP17.92■□□□□ 0.46
CMTM3-207ENST00000564060 WDR45Q9Y484 360 aa17.92■□□□□ 0.46
CMTM3-207ENST00000564060 SLC22A20A6NK97 555 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 C9JVG2 144 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 ZNF264O43296 627 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 EIF4E2O60573 245 aaKnown RBP17.91■□□□□ 0.46
CMTM3-207ENST00000564060 KRT75O95678 551 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 CRHP06850 196 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 UBL4AP11441 157 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 FCGR2AP12318 317 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 PRF1P14222 555 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 ADH6P28332 368 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 ZNF141Q15928 474 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 METTL25Q8N6Q8 603 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 TOR1AIP2Q8NFQ8 470 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 RNASE6Q93091 150 aaKnown RBP17.91■□□□□ 0.46
CMTM3-207ENST00000564060 ROPN1LQ96C74 230 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 CCDC28BQ9BUN5 200 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 KCNN3Q9UGI6 736 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 LIPT1Q9Y234 373 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 ZNF175Q9Y473 711 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 ADGRG4Q8IZF6 3080 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 ITPR2Q14571 2701 aa17.91■□□□□ 0.46
CMTM3-207ENST00000564060 SERINC4A6NH21 518 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 SYT5O00445 386 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 KIAA0513O60268 411 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 ANP32DO95626 131 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 ELK4P28324 431 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 UQCRC1P31930 480 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 MRPL19P49406 292 aaKnown RBP17.9■□□□□ 0.46
CMTM3-207ENST00000564060 POLR2JP52435 117 aaKnown RBP17.9■□□□□ 0.46
CMTM3-207ENST00000564060 RAC1P63000 192 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 CBFBQ13951 182 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 SGCBQ16585 318 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.9■□□□□ 0.46
CMTM3-207ENST00000564060 PDSS1Q5T2R2 415 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 PDZK1Q5T2W1 519 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 POMZP3Q6PJE2 187 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 RNF130Q86XS8 419 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 ZNF619Q8N2I2 560 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 TMCO5AQ8N6Q1 288 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 CKAP2Q8WWK9 683 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 RAB8BQ92930 207 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 INTS12Q96CB8 462 aaKnown RBP17.9■□□□□ 0.46
CMTM3-207ENST00000564060 ITCHQ96J02 903 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 RNF145Q96MT1 663 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 INPP5KQ9BT40 448 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 PINK1Q9BXM7 581 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 PIGMQ9H3S5 423 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 MKLN1Q9UL63 735 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 ICAM5Q9UMF0 924 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 CARD8Q9Y2G2 431 aa17.9■□□□□ 0.46
CMTM3-207ENST00000564060 GPC6Q9Y625 555 aaPredicted RBP17.9■□□□□ 0.46
CMTM3-207ENST00000564060 FAM234BA2RU67 622 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 EEF1E1-BLOC1S5C9J1V9 151 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 EEF1E1O43324 174 aaKnown RBP17.89■□□□□ 0.45
CMTM3-207ENST00000564060 LINGO3P0C6S8 592 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 SUCLG1P53597 346 aaKnown RBP17.89■□□□□ 0.45
CMTM3-207ENST00000564060 CASP9P55211 416 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 CLDN20P56880 219 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 FGFBP1Q14512 234 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 GPAT3Q53EU6 434 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 ESPNLQ6ZVH7 1005 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 KIF18BQ86Y91 864 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 ZNF295-AS1Q8N0V1 137 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 OR5W2Q8NH69 310 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 SAP130Q9H0E3 1048 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 SLC35A3Q9Y2D2 325 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 NOTCH2Q04721 2471 aa17.89■□□□□ 0.45
CMTM3-207ENST00000564060 GJE1A6NN92 205 aa17.88■□□□□ 0.45
CMTM3-207ENST00000564060 SHISA8B8ZZ34 492 aa17.88■□□□□ 0.45
CMTM3-207ENST00000564060 HMGN4O00479 90 aa17.88■□□□□ 0.45
CMTM3-207ENST00000564060 EIF1AYO14602 144 aaKnown RBP17.88■□□□□ 0.45
CMTM3-207ENST00000564060 FCMRO60667 390 aa17.88■□□□□ 0.45
CMTM3-207ENST00000564060 UGT2B17O75795 530 aa17.88■□□□□ 0.45
CMTM3-207ENST00000564060 SASH3O75995 380 aa17.88■□□□□ 0.45
CMTM3-207ENST00000564060 TGM6O95932 706 aa17.88■□□□□ 0.45
CMTM3-207ENST00000564060 CSTAP01040 98 aa17.88■□□□□ 0.45
CMTM3-207ENST00000564060 ZCCHC18P0CG32 403 aa17.88■□□□□ 0.45
CMTM3-207ENST00000564060 PSMA4P25789 261 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms