RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 HPF1Q9NWY4 346 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 KLHL28Q9NXS3 571 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 GPR83Q9NYM4 423 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 FLRT3Q9NZU0 649 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 ABCG2Q9UNQ0 655 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 CHST2Q9Y4C5 530 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 KCNMB2Q9Y691 235 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 BSNQ9UPA5 3926 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 CDHR4A6H8M9 788 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 H3BNH8 94 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 DENRO43583 198 aaKnown RBP11.83□□□□□ -0.52
SPG7-209ENST00000564047 CEACAM4O75871 244 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 EPPINO95925 133 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 LGI1O95970 557 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 SEMG1P04279 462 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 RAP2AP10114 183 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 ENDOUP21128 410 aaKnown RBP11.83□□□□□ -0.52
SPG7-209ENST00000564047 CLK3P49761 638 aaKnown RBP11.83□□□□□ -0.52
SPG7-209ENST00000564047 CCL11P51671 97 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 AQP4P55087 323 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 CHRNB3Q05901 458 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 MRPL2Q5T653 305 aaKnown RBP11.83□□□□□ -0.52
SPG7-209ENST00000564047 FNDC7Q5VTL7 733 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 TMEM81Q6P7N7 255 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 TMEM154Q6P9G4 183 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 ISLR2Q6UXK2 745 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 IL20RBQ6UXL0 311 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 APOOLQ6UXV4 268 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 PRICKLE2Q7Z3G6 844 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 VTCN1Q7Z7D3 282 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 GRAMD2AQ8IUY3 354 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 LILRA2Q8N149 483 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 BEST3Q8N1M1 668 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 ZNF614Q8N883 585 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 OR10G3Q8NGC4 313 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 OR10Q1Q8NGQ4 319 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 APOBEC4Q8WW27 367 aaKnown RBP11.83□□□□□ -0.52
SPG7-209ENST00000564047 GEMIN6Q8WXD5 167 aaKnown RBP11.83□□□□□ -0.52
SPG7-209ENST00000564047 SLC35B4Q969S0 331 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 SLCO4A1Q96BD0 722 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 SLC47A1Q96FL8 570 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 NODALQ96S42 347 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 SEPHS2Q99611 448 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 CPNE5Q9HCH3 593 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 SLC13A4Q9UKG4 626 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 AURKCQ9UQB9 309 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 SLC35A3Q9Y2D2 325 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 AP4S1Q9Y587 144 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 V9GYQ6 96 aa11.83□□□□□ -0.52
SPG7-209ENST00000564047 SPTAN1Q13813 2472 aaKnown RBP11.82□□□□□ -0.52
SPG7-209ENST00000564047 A6NL46 340 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 CLDN24A6NM45 220 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 LYNP07948 512 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 EVI2BP34910 448 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 CASRP41180 1078 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 CYB561P49447 251 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 MFAP5Q13361 173 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 SNTA1Q13424 505 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 TBCELQ5QJ74 424 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 ZNF468Q5VIY5 522 aaPredicted RBP11.82□□□□□ -0.52
SPG7-209ENST00000564047 RTL4Q6ZR62 310 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 MISPQ8IVT2 679 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 CLIP4Q8N3C7 705 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 MARVELD2Q8N4S9 558 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 FDCSPQ8NFU4 85 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 OR5M3Q8NGP4 307 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 GRHL3Q8TE85 626 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 PAQR8Q8TEZ7 354 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 ARHGDIGQ99819 225 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 PKP2Q99959 881 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 UTP23Q9BRU9 249 aaKnown RBP11.82□□□□□ -0.52
SPG7-209ENST00000564047 TBL1XR1Q9BZK7 514 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 RNF32Q9H0A6 362 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 ZNF552Q9H707 407 aaPredicted RBP11.82□□□□□ -0.52
SPG7-209ENST00000564047 HHATLQ9HCP6 504 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 SH2D2AQ9NP31 389 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 IL1RAPQ9NPH3 570 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 RLIMQ9NVW2 624 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 CNIH4Q9P003 139 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 SLC9A8Q9Y2E8 581 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 SH3GLB1Q9Y371 365 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 CHCHD2Q9Y6H1 151 aaPredicted RBP11.82□□□□□ -0.52
SPG7-209ENST00000564047 NBPF19A0A087WUL8 3843 aa11.82□□□□□ -0.52
SPG7-209ENST00000564047 MYO9AB2RTY4 2548 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 ANKRD33BA6NCL7 494 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 PRAMEF25A6NGN4 478 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 ADAM10O14672 748 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 NDUFB5O43674 189 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 ANGPTL1O95841 491 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 CSTAP01040 98 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 IFNW1P05000 195 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 CD96P40200 585 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 CASP3P42574 277 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 MAGEA2P43356 314 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 OC90Q02509 493 aaPredicted RBP11.81□□□□□ -0.52
SPG7-209ENST00000564047 PLAURQ03405 335 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 TUBA3CQ13748 450 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 CD226Q15762 336 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 NRF1Q16656 503 aa11.81□□□□□ -0.52
SPG7-209ENST00000564047 SLC22A10Q63ZE4 541 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms