RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 SLC22A3O75751 556 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 NUDT14O95848 222 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 IL18BPO95998 194 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 KHKP50053 298 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 MYBPHQ13203 477 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 NDUFAF6Q330K2 333 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 ARHGAP11BQ3KRB8 267 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 ATAD3BQ5T9A4 648 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 GTPBP8Q8N3Z3 284 aaPredicted RBP27.71■■■□□ 2.03
CMTM4-204ENST00000563952 GLB1L3Q8NCI6 653 aaPredicted RBP27.71■■■□□ 2.03
CMTM4-204ENST00000563952 RNF145Q96MT1 663 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 SFXN3Q9BWM7 321 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 SLCO1B3Q9NPD5 702 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 FBN2P35556 2912 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 APCP25054 2843 aa27.7■■■□□ 2.03
CMTM4-204ENST00000563952 CCDC154A6NI56 674 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 FCMRO60667 390 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 TNFRSF21O75509 655 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 AGR2O95994 175 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 CDKN2CP42773 168 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 GSTA3Q16772 222 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 PDZK1Q5T2W1 519 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 CBLN3Q6UW01 205 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 LURAP1LQ8IV03 231 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 TRIML2Q8N7C3 387 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 FIG4Q92562 907 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 RNASE6Q93091 150 aaKnown RBP27.7■■■□□ 2.02
CMTM4-204ENST00000563952 LURAP1Q96LR2 239 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 ACBD3Q9H3P7 528 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 STOML1Q9UBI4 398 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 MKLN1Q9UL63 735 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 MED12LQ86YW9 2145 aa27.7■■■□□ 2.02
CMTM4-204ENST00000563952 C1QCP02747 245 aa27.69■■■□□ 2.02
CMTM4-204ENST00000563952 GSNP06396 782 aa27.69■■■□□ 2.02
CMTM4-204ENST00000563952 RPS3AP61247 264 aaKnown RBP27.69■■■□□ 2.02
CMTM4-204ENST00000563952 EPGNQ6UW88 154 aa27.69■■■□□ 2.02
CMTM4-204ENST00000563952 ZNF621Q6ZSS3 439 aa27.69■■■□□ 2.02
CMTM4-204ENST00000563952 RFWD2Q8NHY2 731 aa27.69■■■□□ 2.02
CMTM4-204ENST00000563952 ZNF845Q96IR2 970 aaPredicted RBP27.69■■■□□ 2.02
CMTM4-204ENST00000563952 ZNF559Q9BR84 538 aa27.69■■■□□ 2.02
CMTM4-204ENST00000563952 NMUR2Q9GZQ4 415 aa27.69■■■□□ 2.02
CMTM4-204ENST00000563952 SLC24A3Q9HC58 644 aa27.69■■■□□ 2.02
CMTM4-204ENST00000563952 KCNN3Q9UGI6 736 aa27.69■■■□□ 2.02
CMTM4-204ENST00000563952 L3MBTL1Q9Y468 752 aa27.69■■■□□ 2.02
CMTM4-204ENST00000563952 C7orf72A4D263 438 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 EIF1AYO14602 144 aaKnown RBP27.68■■■□□ 2.02
CMTM4-204ENST00000563952 OPN1LWP04000 364 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 P2RX1P51575 399 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 LRRC74AQ0VAA2 488 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 SGCBQ16585 318 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 FBXL19-AS1Q494R0 122 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 HEPHL1Q6MZM0 1159 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 GGNQ86UU5 652 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 RNF130Q86XS8 419 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 TMCO5AQ8N6Q1 288 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 ZNF350Q9GZX5 532 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 TMEM185BQ9H7F4 350 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 MCCC2Q9HCC0 563 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 ZIM2Q9NZV7 527 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 ICAM5Q9UMF0 924 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 DCHS2Q6V1P9 2916 aa27.68■■■□□ 2.02
CMTM4-204ENST00000563952 IL6P05231 212 aa27.67■■■□□ 2.02
CMTM4-204ENST00000563952 UBL4AP11441 157 aa27.67■■■□□ 2.02
CMTM4-204ENST00000563952 PPP2R2AP63151 447 aa27.67■■■□□ 2.02
CMTM4-204ENST00000563952 PON3Q15166 354 aa27.67■■■□□ 2.02
CMTM4-204ENST00000563952 PPP4R4Q6NUP7 873 aa27.67■■■□□ 2.02
CMTM4-204ENST00000563952 METTL25Q8N6Q8 603 aa27.67■■■□□ 2.02
CMTM4-204ENST00000563952 POC1BQ8TC44 478 aa27.67■■■□□ 2.02
CMTM4-204ENST00000563952 SDR39U1Q9NRG7 319 aaPredicted RBP27.67■■■□□ 2.02
CMTM4-204ENST00000563952 INTS9Q9NV88 658 aaKnown RBP27.67■■■□□ 2.02
CMTM4-204ENST00000563952 KCNE5Q9UJ90 142 aa27.67■■■□□ 2.02
CMTM4-204ENST00000563952 CENPVL1A0A0U1RR11 272 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 SERINC4A6NH21 518 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 LINGO3P0C6S8 592 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 PSMA4P25789 261 aaKnown RBP27.66■■■□□ 2.02
CMTM4-204ENST00000563952 EIF1AXP47813 144 aaKnown RBP27.66■■■□□ 2.02
CMTM4-204ENST00000563952 CCR4P51679 360 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 SUMO3P55854 103 aaPredicted RBP27.66■■■□□ 2.02
CMTM4-204ENST00000563952 KRTAP10-9P60411 292 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 FOXF1Q12946 379 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 ZNF141Q15928 474 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 OR2A2Q6IF42 318 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 DNAJC14Q6Y2X3 702 aaPredicted RBP27.66■■■□□ 2.02
CMTM4-204ENST00000563952 LUZP2Q86TE4 346 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 MIER2Q8N344 545 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 FNDC9Q8TBE3 224 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 ROPN1LQ96C74 230 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 JKAMPQ9P055 326 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 FOXD3Q9UJU5 478 aaPredicted RBP27.66■■■□□ 2.02
CMTM4-204ENST00000563952 WDR45Q9Y484 360 aa27.66■■■□□ 2.02
CMTM4-204ENST00000563952 LRBAP50851 2863 aa27.65■■■□□ 2.02
CMTM4-204ENST00000563952 A0A1W2PNV4 684 aa27.65■■■□□ 2.02
CMTM4-204ENST00000563952 RFXANKO14593 260 aa27.65■■■□□ 2.02
CMTM4-204ENST00000563952 ZNF264O43296 627 aa27.65■■■□□ 2.02
CMTM4-204ENST00000563952 CYP7B1O75881 506 aa27.65■■■□□ 2.02
CMTM4-204ENST00000563952 ME2P23368 584 aa27.65■■■□□ 2.02
CMTM4-204ENST00000563952 KIR2DL3P43628 341 aa27.65■■■□□ 2.02
CMTM4-204ENST00000563952 FUT5Q11128 374 aa27.65■■■□□ 2.02
CMTM4-204ENST00000563952 GPAT3Q53EU6 434 aa27.65■■■□□ 2.02
CMTM4-204ENST00000563952 CNEP1R1Q8N9A8 125 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms