RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 GTPBP1O00178 669 aaKnown RBP15.86■□□□□ 0.13
NME3-205ENST00000563854 OIP5O43482 229 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 DIAPH2O60879 1101 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 GOSR1O95249 250 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 MYZAPP0CAP1 466 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 CD99P14209 185 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 BGNP21810 368 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 SLC1A6P48664 564 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 CCR4P51679 360 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 CTBP2P56545 445 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 CLDN8P56748 225 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 RIPPLY3P57055 190 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 FGFBP1Q14512 234 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 HBMQ6B0K9 141 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 FAM214BQ7L5A3 538 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 OR4A15Q8NGL6 344 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 OR2V1Q8NHB1 315 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 PSMA8Q8TAA3 256 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 POC1BQ8TC44 478 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 ACTRT2Q8TDY3 377 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 MOAP1Q96BY2 351 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 WFIKKN1Q96NZ8 548 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 KLHL4Q9C0H6 718 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 CXXC4Q9H2H0 198 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 AKTIPQ9H8T0 292 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 PLEKHF2Q9H8W4 249 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 RAP2CQ9Y3L5 183 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 MED13LQ71F56 2210 aa15.86■□□□□ 0.13
NME3-205ENST00000563854 A0A0J9YW62 118 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 RNF103-CHMP3A0A140T963 221 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 C7orf72A4D263 438 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 TM9SF1O15321 606 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 BIRC5O15392 142 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 ATE1O95260 518 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 CGAP01215 116 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 CD8BP10966 210 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 IL11P20809 199 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 CCKARP32238 428 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 UGT2B10P36537 528 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 CASP9P55211 416 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 RAC1P63000 192 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 CTU2Q2VPK5 515 aaKnown RBP15.85■□□□□ 0.13
NME3-205ENST00000563854 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.85■□□□□ 0.13
NME3-205ENST00000563854 PDSS1Q5T2R2 415 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 ANKRD34AQ69YU3 496 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 BHLHB9Q6PI77 547 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 CBLN3Q6UW01 205 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 CAMKMTQ7Z624 323 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 ANKRD46Q86W74 232 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 TGIF2LYQ8IUE0 185 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 LILRA2Q8N149 483 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 ANKRD42Q8N9B4 389 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 ATP6V1C2Q8NEY4 427 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 PIK3IP1Q96FE7 263 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 SLC35G5Q96KT7 338 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 KLHL15Q96M94 604 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 ZIM3Q96PE6 472 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 DPY30Q9C005 99 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 C20orf27Q9GZN8 174 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 HOXD1Q9GZZ0 328 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 ELOVL5Q9NYP7 299 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 ZNF226Q9NYT6 803 aa15.85■□□□□ 0.13
NME3-205ENST00000563854 A0A1W2PPR1 153 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 C16orf97H3BN30 126 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 CYP7B1O75881 506 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 LINGO3P0C6S8 592 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 KLK2P20151 261 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 MATN1P21941 496 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 PSMA4P25789 261 aaKnown RBP15.84■□□□□ 0.13
NME3-205ENST00000563854 SHC1P29353 583 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 RPL14P50914 215 aaKnown RBP15.84■□□□□ 0.13
NME3-205ENST00000563854 P2RX1P51575 399 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 ATP12AP54707 1039 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 STX3Q13277 289 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 GUSBP1Q15486 140 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 GPR68Q15743 365 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 DEFB113Q30KQ7 82 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 KLHL26Q53HC5 615 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 ESPNLQ6ZVH7 1005 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 OLIG3Q7RTU3 272 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 MTERF4Q7Z6M4 381 aaKnown RBP15.84■□□□□ 0.13
NME3-205ENST00000563854 FBXO27Q8NI29 283 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 GMPPAQ96IJ6 420 aaPredicted RBP15.84■□□□□ 0.13
NME3-205ENST00000563854 ADGRG7Q96K78 797 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 ALPK1Q96QP1 1244 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 SORT1Q99523 831 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 NUF2Q9BZD4 464 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 C12orf49Q9H741 205 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 SSU72Q9NP77 194 aaKnown RBP15.84■□□□□ 0.13
NME3-205ENST00000563854 PAQR5Q9NXK6 330 aaPredicted RBP15.84■□□□□ 0.13
NME3-205ENST00000563854 ASIC5Q9NY37 505 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 PCDHGB4Q9UN71 923 aa15.84■□□□□ 0.13
NME3-205ENST00000563854 ZNF500O60304 480 aaPredicted RBP15.83■□□□□ 0.12
NME3-205ENST00000563854 CPSF4O95639 269 aaKnown RBP15.83■□□□□ 0.12
NME3-205ENST00000563854 UBL4AP11441 157 aa15.83■□□□□ 0.12
NME3-205ENST00000563854 EIF1P41567 113 aaKnown RBP15.83■□□□□ 0.12
NME3-205ENST00000563854 C21orf58P58505 322 aa15.83■□□□□ 0.12
NME3-205ENST00000563854 OCRLQ01968 901 aa15.83■□□□□ 0.12
NME3-205ENST00000563854 MPP2Q14168 576 aa15.83■□□□□ 0.12
NME3-205ENST00000563854 TOMM34Q15785 309 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms