RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 UNC5CO95185 931 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 HMGN2P05204 90 aaKnown RBP4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 CT45A8P0DMV1 189 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 CT45A9P0DMV2 189 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 ICAM2P13598 275 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 CPOXP36551 454 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 PPICP45877 212 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 CLCN2P51788 898 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 PRKAG1P54619 331 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 CASP9P55211 416 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 MLF1P58340 268 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 CXADRP78310 365 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 PSG6Q00889 435 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 FUT5Q11128 374 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 ZNF155Q12901 538 aaPredicted RBP4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 STX5Q13190 355 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 TP53BP2Q13625 1128 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 SELPLGQ14242 412 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 LASP1Q14847 261 aaKnown RBP4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 MAPK11Q15759 364 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 NNATQ16517 81 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 TBR1Q16650 682 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 DUSP5Q16690 384 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 SPDYE7PQ495Y7 208 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 RUNDC3AQ59EK9 446 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 CT45A2Q5DJT8 189 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 B3GNTL1Q67FW5 361 aaPredicted RBP4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 FCRLBQ6BAA4 426 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 TCTN3Q6NUS6 607 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 CDC73Q6P1J9 531 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 HACD2Q6Y1H2 254 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 LGI4Q8N135 537 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 GALNT16Q8N428 558 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 SIRT6Q8N6T7 355 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 HORMAD2Q8N7B1 307 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 CDRT4Q8N9R6 151 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 SLC16A11Q8NCK7 471 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 OR52N2Q8NGI0 321 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 OR5D16Q8NGK9 328 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 OR8K3Q8NH51 312 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 NUBPLQ8TB37 319 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 FBXO30Q8TB52 745 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 PNPT1Q8TCS8 783 aaKnown RBP4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 MIPOL1Q8TD10 442 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 LRRC58Q96CX6 371 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 OTUB1Q96FW1 271 aaPredicted RBP4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 C16orf58Q96GQ5 468 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 NSL1Q96IY1 281 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 THOC3Q96J01 351 aaKnown RBP4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 CLPTM1LQ96KA5 538 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 SLC35G5Q96KT7 338 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 SNX22Q96L94 193 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 ANKRD27Q96NW4 1050 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 MS4A4EQ96PG1 132 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 OR7D2Q96RA2 312 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 LMF1Q96S06 567 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 CGREF1Q99674 301 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 LMF2Q9BU23 707 aaKnown RBP4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 ACTRT3Q9BYD9 372 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 DEFB126Q9BYW3 111 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 LHPPQ9H008 270 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 NXF5Q9H1B4 397 aaKnown RBP4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 PRORYQ9H606 182 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 LIN28AQ9H9Z2 209 aaKnown RBP4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 TPT1P8Q9HAU6 139 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 IL1RL2Q9HB29 575 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 C3orf14Q9HBI5 128 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 EQTNQ9NQ60 294 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 COPS7AQ9UBW8 275 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 AASSQ9UDR5 926 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 PRODH2Q9UF12 536 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 VPS4AQ9UN37 437 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 PCDHGB4Q9UN71 923 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 KCNE3Q9Y6H6 103 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 PMF1-BGLAPU3KQ54 211 aa4.78□□□□□ -1.64
HERPUD1-207ENST00000563781 C2orf92A0A1B0GVN3 265 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 FRG2CA6NGY1 282 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 A6NL46 340 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 CLIC1O00299 241 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 WWP2O00308 870 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 HMGN4O00479 90 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 ADAM10O14672 748 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 AIM2O14862 343 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 ASNA1O43681 348 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 TSPAN2O60636 221 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 APOL3O95236 402 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 ANP32DO95626 131 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 MPIG6BO95866 241 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 NPPAP01160 153 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 IGKV1D-16P01601 117 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 MT-ND5P03915 603 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 KRT16P08779 473 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 OR12D1P0DN82 309 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 ETFAP13804 333 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 GPX2P18283 190 aa4.77□□□□□ -1.65
HERPUD1-207ENST00000563781 DRD5P21918 477 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms