RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 NGFRP08138 427 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 HTR2AP28223 471 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 EVI2BP34910 448 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 DAPP51397 102 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 RAD23AP54725 363 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 FBXW4P57775 412 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 TRAM2Q15035 370 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 ZIK1Q3SY52 487 aaPredicted RBP20.15■□□□□ 0.82
LINC01960-201ENST00000563759 NHSL2Q5HYW2 709 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 DTX1Q86Y01 620 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 TMCO5AQ8N6Q1 288 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 CYGBQ8WWM9 190 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 SLC41A3Q96GZ6 507 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 FEVQ99581 238 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 ZNF559Q9BR84 538 aa20.15■□□□□ 0.82
LINC01960-201ENST00000563759 GTPBP1O00178 669 aaKnown RBP20.14■□□□□ 0.81
LINC01960-201ENST00000563759 FAAHO00519 579 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 ADH7P40394 386 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 MERTKQ12866 999 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 EPS8Q12929 822 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 MED21Q13503 144 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 RFX4Q33E94 735 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 CMPK2Q5EBM0 449 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 FNDC7Q5VTL7 733 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 KDM4DQ6B0I6 523 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 FAHD1Q6P587 224 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 APOOLQ6UXV4 268 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 GALNT5Q7Z7M9 940 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 SLC5A8Q8N695 610 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 RASL10BQ96S79 203 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 IL17BQ9UHF5 180 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 TMEFF2Q9UIK5 374 aaPredicted RBP20.14■□□□□ 0.81
LINC01960-201ENST00000563759 SLC7A7Q9UM01 511 aa20.14■□□□□ 0.81
LINC01960-201ENST00000563759 A0A1W2PQD3 144 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 TRAPPC13A5PLN9 417 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 ARRDC5A6NEK1 342 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 ALG1L2C9J202 215 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 MASP2O00187 686 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 ZNF264O43296 627 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 NDUFB5O43674 189 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 OR10H3O60404 316 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 ITGA10O75578 1167 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 ANXA8P13928 327 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 NAGAP17050 411 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 RYKP34925 604 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 CCR4P51679 360 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 SEC23BQ15437 767 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 OR1Q1Q15612 314 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 WLSQ5T9L3 541 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 GDF7Q7Z4P5 450 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 ZNF440Q8IYI8 595 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 DHRSXQ8N5I4 330 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 POGLUT1Q8NBL1 392 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 SLC38A4Q969I6 547 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 TMCO6Q96DC7 493 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 ZNF570Q96NI8 536 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 TOR3AQ9H497 397 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 ANKRD19PQ9H560 264 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 ZNF556Q9HAH1 456 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 TMEM27Q9HBJ8 222 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 EML6Q6ZMW3 1958 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 SCO2O43819 266 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 DXOO77932 396 aaKnown RBP20.13■□□□□ 0.81
LINC01960-201ENST00000563759 LIPCP11150 499 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 ITGAMP11215 1152 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 CDH2P19022 906 aaPredicted RBP20.13■□□□□ 0.81
LINC01960-201ENST00000563759 ATP1A4Q13733 1029 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 TGIF1Q15583 401 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 PODNL1Q6PEZ8 512 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 AQP11Q8NBQ7 271 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 FAM71CQ8NEG0 241 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 RNF217Q8TC41 542 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 PSD2Q9BQI7 771 aa20.13■□□□□ 0.81
LINC01960-201ENST00000563759 SH3PXD2BA1X283 911 aa20.12■□□□□ 0.81
LINC01960-201ENST00000563759 DCDC2BA2VCK2 349 aa20.12■□□□□ 0.81
LINC01960-201ENST00000563759 ADAM11O75078 769 aa20.12■□□□□ 0.81
LINC01960-201ENST00000563759 ACAA2P42765 397 aaKnown RBP20.12■□□□□ 0.81
LINC01960-201ENST00000563759 SKP2Q13309 424 aa20.12■□□□□ 0.81
LINC01960-201ENST00000563759 FCRLBQ6BAA4 426 aa20.12■□□□□ 0.81
LINC01960-201ENST00000563759 MARCH3Q86UD3 253 aa20.12■□□□□ 0.81
LINC01960-201ENST00000563759 SLC15A4Q8N697 577 aa20.12■□□□□ 0.81
LINC01960-201ENST00000563759 GRHL3Q8TE85 626 aa20.12■□□□□ 0.81
LINC01960-201ENST00000563759 CNBD2Q96M20 576 aa20.12■□□□□ 0.81
LINC01960-201ENST00000563759 TRIM2Q9C040 744 aa20.12■□□□□ 0.81
LINC01960-201ENST00000563759 CARD8Q9Y2G2 431 aa20.12■□□□□ 0.81
LINC01960-201ENST00000563759 MPDZO75970 2070 aa20.12■□□□□ 0.81
LINC01960-201ENST00000563759 MITFO75030 526 aaPredicted RBP20.11■□□□□ 0.81
LINC01960-201ENST00000563759 CLK3P49761 638 aaKnown RBP20.11■□□□□ 0.81
LINC01960-201ENST00000563759 CADM2Q8N3J6 435 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 OR4K5Q8NGD3 323 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 TFAP2CQ92754 450 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 SPACA9Q96E40 222 aaPredicted RBP20.11■□□□□ 0.81
LINC01960-201ENST00000563759 FUZQ9BT04 418 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 PCNX3Q9H6A9 2034 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 EXOSC3Q9NQT5 275 aaKnown RBP20.11■□□□□ 0.81
LINC01960-201ENST00000563759 RPS6KB2Q9UBS0 482 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 DENRO43583 198 aaKnown RBP20.11■□□□□ 0.81
LINC01960-201ENST00000563759 FADS1O60427 444 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 ANGPTL1O95841 491 aa20.11■□□□□ 0.81
LINC01960-201ENST00000563759 FBXO45P0C2W1 286 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms