RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 HSP90B2PQ58FF3 399 aa13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 TYW3Q6IPR3 259 aaKnown RBP13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 BHLHB9Q6PI77 547 aa13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 MEX3BQ6ZN04 569 aaKnown RBP13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 FRRS1Q6ZNA5 592 aa13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 FUNDC1Q8IVP5 155 aa13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 FAM71CQ8NEG0 241 aa13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 CKAP2Q8WWK9 683 aa13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 EBF4Q9BQW3 602 aa13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 HOXD1Q9GZZ0 328 aa13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 PTGES2Q9H7Z7 377 aa13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 DTNAQ9Y4J8 743 aa13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 CREBBPQ92793 2442 aa13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 SPG11Q96JI7 2443 aa13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 ZNF469Q96JG9 3925 aaPredicted RBP13.33□□□□□ -0.28
RPUSD1-204ENST00000563560 DUXAA6NLW8 204 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 H0Y3Z8 333 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 KIAA0513O60268 411 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 BCAS1O75363 584 aaPredicted RBP13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 TGDSO95455 350 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 AK1P00568 194 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 IL2RAP01589 272 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 CTSSP25774 331 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 IDH3AP50213 366 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 RNF144AP50876 292 aaPredicted RBP13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 PPP2R2AP63151 447 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 SRYQ05066 204 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 SKP2Q13309 424 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 SF3B4Q15427 424 aaKnown RBP eCLIP13.32□□□□□ -0.286e-6■□□□□ 11
RPUSD1-204ENST00000563560 TOMM34Q15785 309 aaPredicted RBP13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 NDUFAF6Q330K2 333 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 FLYWCH1Q4VC44 716 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 SLC25A53Q5H9E4 307 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 RAET1LQ5VY80 246 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 ZFP90Q8TF47 636 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 STON2Q8WXE9 905 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 FIG4Q92562 907 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 RAB8BQ92930 207 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 ZG16BQ96DA0 208 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 ARSGQ96EG1 525 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 DTNBP1Q96EV8 351 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 OR52E6Q96RD3 313 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 PIGQQ9BRB3 760 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 SLC35A5Q9BS91 424 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 FAM53CQ9NYF3 392 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 VDAC3Q9Y277 283 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 AP4B1Q9Y6B7 739 aa13.32□□□□□ -0.28
RPUSD1-204ENST00000563560 FAM221AA4D161 298 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 CCDC154A6NI56 674 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 SCDO00767 359 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 ADAMDEC1O15204 470 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 UBDO15205 165 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 ADAM11O75078 769 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 SLC22A3O75751 556 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 OR12D1P0DN82 309 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 POU3F2P20265 443 aaPredicted RBP13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 BMP5P22003 454 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 RCAN2Q14206 197 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 COX20Q5RI15 118 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 PDZK1Q5T2W1 519 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 TNFAIP8L2Q6P589 184 aaPredicted RBP13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 MSANTD1Q6ZTZ1 278 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 GDF7Q7Z4P5 450 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 VPS37AQ8NEZ2 397 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 B4GALNT2Q8NHY0 566 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 GPR119Q8TDV5 335 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 LRRC8CQ8TDW0 803 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 OIT3Q8WWZ8 545 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 ZBTB8AQ96BR9 441 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 SH3YL1Q96HL8 342 aaPredicted RBP13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 ZNF845Q96IR2 970 aaPredicted RBP13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 RNF145Q96MT1 663 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 ZFP3Q96NJ6 502 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 TM9SF2Q99805 663 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 SLC38A1Q9H2H9 487 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 ZNF385DQ9H6B1 395 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 HHATLQ9HCP6 504 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 MKLN1Q9UL63 735 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 CARD8Q9Y2G2 431 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 FREM1Q5H8C1 2179 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 CCDC168Q8NDH2 2452 aa13.31□□□□□ -0.28
RPUSD1-204ENST00000563560 H3BML4 177 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 DVL2O14641 736 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 GMFGO60234 142 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 STX11O75558 287 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 IL6P05231 212 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 GSNP06396 782 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 ZCCHC18P0CG32 403 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 TMIGD3P0DMS9 266 aaPredicted RBP13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 RPS4Y1P22090 263 aaKnown RBP13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 SHC1P29353 583 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 OPRM1P35372 400 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 GCKP35557 465 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 PGM1P36871 562 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 ASCL1P50553 236 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 P2RX1P51575 399 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 AGFG1P52594 562 aaKnown RBP13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 SUMO3P55854 103 aaPredicted RBP13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 LRRC74AQ0VAA2 488 aa13.3□□□□□ -0.28
RPUSD1-204ENST00000563560 FGFBP1Q14512 234 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms