RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 HEATR5AQ86XA9 2040 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 A0A0B4J2E0 115 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 A0A1B0GWA3 101 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 A0A1B0GX12 115 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 UNC119BA6NIH7 251 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 A8MUA0 341 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 KDM4EB2RXH2 506 aaPredicted RBP17.64■□□□□ 0.41
SMPD3-203ENST00000563226 GUSBP08236 651 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 IDUAP35475 653 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 ETV5P41161 510 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 GCGRP47871 477 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 ETV1P50549 477 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 RPS3AP61247 264 aaKnown RBP17.64■□□□□ 0.41
SMPD3-203ENST00000563226 C19orf48Q6RUI8 117 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 SHFQ7M4L6 423 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 BTLAQ7Z6A9 289 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 GATAD2AQ86YP4 633 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 GRAMD2AQ8IUY3 354 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 UBALD2Q8IYN6 164 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 PTPMT1Q8WUK0 201 aaPredicted RBP17.64■□□□□ 0.41
SMPD3-203ENST00000563226 CLIP3Q96DZ5 547 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 RNFT2Q96EX2 444 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 OR52D1Q9H346 318 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 MEPEQ9NQ76 525 aaPredicted RBP17.64■□□□□ 0.41
SMPD3-203ENST00000563226 FSCN3Q9NQT6 498 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 PNO1Q9NRX1 252 aaKnown RBP17.64■□□□□ 0.41
SMPD3-203ENST00000563226 SIDT1Q9NXL6 827 aaKnown RBP17.64■□□□□ 0.41
SMPD3-203ENST00000563226 CBLCQ9ULV8 474 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 OR10H1Q9Y4A9 318 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 NUP210LQ5VU65 1888 aa17.64■□□□□ 0.41
SMPD3-203ENST00000563226 CCRL2O00421 344 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 SOX30O94993 753 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 RAB36O95755 333 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 PDGFBP01127 241 aaPredicted RBP17.63■□□□□ 0.41
SMPD3-203ENST00000563226 DHPSP49366 369 aaPredicted RBP17.63■□□□□ 0.41
SMPD3-203ENST00000563226 PRKCDQ05655 676 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 SERTAD2Q14140 314 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 FGFBP1Q14512 234 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 SPHARQ15513 63 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 ZNF141Q15928 474 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 ZNF613Q6PF04 617 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 CLDN22Q8N7P3 220 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 BBS1Q8NFJ9 593 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 OR4C3Q8NH37 302 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 FANK1Q8TC84 345 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 VMP1Q96GC9 406 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 PLEKHA8Q96JA3 519 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 MND1Q9BWT6 205 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 TMEM27Q9HBJ8 222 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 KRCC1Q9NPI7 259 aaPredicted RBP17.63■□□□□ 0.41
SMPD3-203ENST00000563226 TNRC6BQ9UPQ9 1833 aaKnown RBP17.63■□□□□ 0.41
SMPD3-203ENST00000563226 SYNDIG1LA6NDD5 238 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 SCG5P05408 212 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 UGT2B10P36537 528 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 MINDY4Q4G0A6 757 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 AADACL4Q5VUY2 407 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 RNLSQ5VYX0 342 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 CROCCP3Q8IVE0 287 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 RNF113BQ8IZP6 322 aaKnown RBP17.63■□□□□ 0.41
SMPD3-203ENST00000563226 OR2T33Q8NG76 320 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 OR13C2Q8NGS9 318 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 CCDC74AQ96AQ1 378 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 SENP5Q96HI0 755 aaPredicted RBP17.63■□□□□ 0.41
SMPD3-203ENST00000563226 SLC41A2Q96JW4 573 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 ZNF578Q96N58 590 aaPredicted RBP17.63■□□□□ 0.41
SMPD3-203ENST00000563226 UBQLN3Q9H347 655 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 AKIP1Q9NQ31 210 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 C14orf105Q9NVL8 296 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 SEMA5BQ9P283 1151 aa17.63■□□□□ 0.41
SMPD3-203ENST00000563226 C19orf67A6NJJ6 358 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 NGFRP08138 427 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 TBXA2RP21731 343 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 ATP12AP54707 1039 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 GPLD1P80108 840 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 TMPRSS9Q7Z410 1059 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 PROKR2Q8NFJ6 384 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 BRIX1Q8TDN6 353 aaKnown RBP17.62■□□□□ 0.41
SMPD3-203ENST00000563226 EFHD2Q96C19 240 aaPredicted RBP17.62■□□□□ 0.41
SMPD3-203ENST00000563226 BPIFA2Q96DR5 249 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 PRRG3Q9BZD7 231 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.62■□□□□ 0.41
SMPD3-203ENST00000563226 MRPS18AQ9NVS2 196 aaKnown RBP17.62■□□□□ 0.41
SMPD3-203ENST00000563226 GMEB2Q9UKD1 530 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 DSCR3O14972 297 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 CHP2O43745 196 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 GALNSP34059 522 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 MTNR1AP48039 350 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 DBPQ10586 325 aaPredicted RBP17.62■□□□□ 0.41
SMPD3-203ENST00000563226 C1orf189Q5VU69 101 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 LYSMD4Q5XG99 296 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 THSD4Q6ZMP0 1018 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 CARFQ8N187 725 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 CYP4Z2PQ8N1L4 340 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 OR6Q1Q8NGQ2 317 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 HS6ST2Q96MM7 605 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 G6PC3Q9BUM1 346 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 ENAMQ9NRM1 1142 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 MED31Q9Y3C7 131 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 VPS13AQ96RL7 3174 aa17.62■□□□□ 0.41
SMPD3-203ENST00000563226 hCG_2014768A0A024R1R8 64 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms