RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 AHCYL2Q96HN2 611 aaKnown RBP13□□□□□ -0.33
VPS9D1-202ENST00000561976 C4orf36Q96KX1 117 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 TIMP4Q99727 224 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 LGR4Q9BXB1 951 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 ACTRT3Q9BYD9 372 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 HEXA-AS1Q9H8Q6 139 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 EVA1BQ9NVM1 165 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 NKIRAS2Q9NYR9 191 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 ZNF224Q9NZL3 707 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 RABL2AQ9UBK7 228 aaPredicted RBP13□□□□□ -0.33
VPS9D1-202ENST00000561976 ZNF780BQ9Y6R6 833 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 LAMA3Q16787 3333 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 COL4A6Q14031 1691 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 ZIC2O95409 532 aaPredicted RBP13□□□□□ -0.33
VPS9D1-202ENST00000561976 MT-ND4P03905 459 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 RAB3BP20337 219 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 ATP5A1P25705 553 aaKnown RBP13□□□□□ -0.33
VPS9D1-202ENST00000561976 EXOSC2Q13868 293 aaKnown RBP13□□□□□ -0.33
VPS9D1-202ENST00000561976 KRT33BQ14525 404 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 ZNF267Q14586 743 aaPredicted RBP13□□□□□ -0.33
VPS9D1-202ENST00000561976 DHCR24Q15392 516 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 ST3GAL2Q16842 350 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 PUS10Q3MIT2 529 aaKnown RBP13□□□□□ -0.33
VPS9D1-202ENST00000561976 LGALSLQ3ZCW2 172 aaPredicted RBP13□□□□□ -0.33
VPS9D1-202ENST00000561976 SLC48A1Q6P1K1 146 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 C12orf40Q86WS4 652 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 C17orf47Q8NEP4 570 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 PXYLP1Q8TE99 480 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 SMAP2Q8WU79 429 aaPredicted RBP13□□□□□ -0.33
VPS9D1-202ENST00000561976 YIPF5Q969M3 257 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 NXPE2Q96DL1 559 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 SLC35A4Q96G79 324 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 SORCS2Q96PQ0 1159 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 CD180Q99467 661 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 ENKD1Q9H0I2 346 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 PRDM7Q9NQW5 492 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 ZNF443Q9Y2A4 671 aaPredicted RBP13□□□□□ -0.33
VPS9D1-202ENST00000561976 A0A0B4J203 849 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 PRR23D1E9PI22 279 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 GPR171O14626 319 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 MOSPD3O75425 235 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 TOXO94900 526 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 PRR23D2P0DMB1 279 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 F3P13726 295 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 SNRPBP14678 240 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 DRD5P21918 477 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 RAB14P61106 215 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 NTHL1P78549 312 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 PITPNAQ00169 270 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 MESP2Q0VG99 397 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 TRAM1Q15629 374 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 ACSM3Q53FZ2 586 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 TCEAL5Q5H9L2 206 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 FCRLBQ6BAA4 426 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 ABHD17CQ6PCB6 329 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 SLC16A11Q8NCK7 471 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 CEP76Q8TAP6 659 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 NXPE3Q969Y0 559 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 MS4A3Q96HJ5 214 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 IFT27Q9BW83 186 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 GSDMCQ9BYG8 508 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 MRPS30Q9NP92 439 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 COPZ2Q9P299 210 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 UBQLN2Q9UHD9 624 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 NUMA1Q14980 2115 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 A0A0G2JK05 382 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 A0A1W2PRG6 482 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 CARNS1A5YM72 827 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 FAM86C2PA6NEL3 165 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 ANTXRLA6NF34 631 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 LATO43561 262 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 PLPP2O43688 288 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 RHOP08100 348 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 CISD3P0C7P0 127 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 DDX6P26196 483 aaKnown RBP eCLIP12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 TEAD1P28347 426 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 PPM1AP35813 382 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 GSG1Q2KHT4 349 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 CDONQ4KMG0 1287 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 TJAP1Q5JTD0 557 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 ESPNLQ6ZVH7 1005 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 GLRX5Q86SX6 157 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 GPALPP1Q8IXQ4 340 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 ZNF687Q8N1G0 1237 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 BMPERQ8N8U9 685 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 OR13C5Q8NGS8 318 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 OR2A1Q8NGT9 310 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 RPLP0P6Q8NHW5 317 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 ING5Q8WYH8 240 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 CDS1Q92903 461 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 HS6ST2Q96MM7 605 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 TTTY10Q9BZA0 68 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 CDCP1Q9H5V8 836 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 C6orf106Q9H6K1 298 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 BRD7Q9NPI1 651 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 SIDT1Q9NXL6 827 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 WDR45Q9Y484 360 aa12.99□□□□□ -0.33
VPS9D1-202ENST00000561976 A0A1B0GVI7 797 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 LRRN3E7EW58 273 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 UBL3O95164 117 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms