RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ZNF551Q7Z340 670 aaPredicted RBP10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 MISPQ8IVT2 679 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 OR6Y1Q8NGX8 325 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 POC1BQ8TC44 478 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 ACMSDQ8TDX5 336 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 EPS8L3Q8TE67 593 aaKnown RBP10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 RNF128Q8TEB7 428 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 HSD17B8Q92506 261 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 OSTF1Q92882 214 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 FBXW5Q969U6 566 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 CCDC126Q96EE4 140 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 EGLN2Q96KS0 407 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 KLHL15Q96M94 604 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 ESRP2Q9H6T0 727 aaKnown RBP10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 C12orf49Q9H741 205 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 LRTM1Q9HBL6 345 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 GP6Q9HCN6 339 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 EQTNQ9NQ60 294 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 UBQLN4Q9NRR5 601 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 FBXO34Q9NWN3 711 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 ZANQ9Y493 2812 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 COL6A5A8TX70 2615 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 A0A1W2PQD3 144 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 TLDC2A0PJX2 215 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 NPIPB8E9PQR5 432 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 TBX19O60806 448 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 KCNK2O95069 426 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 HSPA4LO95757 839 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 TP53P04637 393 aaPredicted RBP10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 CD3EP07766 207 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 GSTA1P08263 222 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 LINGO3P0C6S8 592 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 HPGDP15428 266 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 PRPH2P23942 346 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 ADH6P28332 368 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 LSP1P33241 339 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 GPC1P35052 558 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 EIF1P41567 113 aaKnown RBP10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 HSPB3Q12988 150 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 P2RY6Q15077 328 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 RNPS1Q15287 305 aaKnown RBP10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 TAB1Q15750 504 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 ZNF239Q16600 458 aaKnown RBP10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 SFRP5Q5T4F7 317 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 HMBOX1Q6NT76 420 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 ZCCHC12Q6PEW1 402 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 PODNL1Q6PEZ8 512 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 FIGNL1Q6PIW4 674 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 TFAP2EQ6VUC0 442 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 HIPK1Q86Z02 1210 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 LILRA2Q8N149 483 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 CCNYL1Q8N7R7 359 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 GATSQ8NAP1 163 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 SLC16A11Q8NCK7 471 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 MAPK1IP1LQ8NDC0 245 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 ZFP28Q8NHY6 868 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 SMAP2Q8WU79 429 aaPredicted RBP10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 ROBO4Q8WZ75 1007 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 CPNE4Q96A23 557 aaPredicted RBP10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 GIMAP5Q96F15 307 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 REXO5Q96IC2 774 aaKnown RBP10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 MS4A4EQ96PG1 132 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 GRIP2Q9C0E4 1043 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 SLCO5A1Q9H2Y9 848 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 TMEM185BQ9H7F4 350 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 TIGARQ9NQ88 270 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 KLHL13Q9P2N7 655 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 DCDC2Q9UHG0 476 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 CCL27Q9Y4X3 112 aa10.53□□□□□ -0.72
CARMIL3-204ENST00000561354 SCDO00767 359 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 CLOCKO15516 846 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 PDPK1O15530 556 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 CD5LO43866 347 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 SEC22BO75396 215 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 IFNA2P01563 188 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 FESP07332 822 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 ACP2P11117 423 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 IL32P24001 234 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 ELK4P28324 431 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 FRKP42685 505 aaPredicted RBP10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 SERPINB4P48594 390 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 SLC18A1P54219 525 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 PRKAG1P54619 331 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 MANFP55145 182 aaKnown RBP10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 ZSCAN26Q16670 478 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 DUSP5Q16690 384 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 EXOSC6Q5RKV6 272 aaKnown RBP10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 ALKBH2Q6NS38 261 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 NUFIP2Q7Z417 695 aaKnown RBP10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 ZAR1Q86SH2 424 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 NUP43Q8NFH3 380 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 B4GALNT2Q8NHY0 566 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 PIWIL2Q8TC59 973 aaKnown RBP10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 ABHD3Q8WU67 409 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 GTPBP3Q969Y2 492 aaKnown RBP10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 CIDECQ96AQ7 238 aaPredicted RBP10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 ZBTB9Q96C00 473 aa10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 ZBED6CLQ96FA7 236 aaPredicted RBP10.52□□□□□ -0.73
CARMIL3-204ENST00000561354 SH3YL1Q96HL8 342 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms