RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 EXD2Q9NVH0 621 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 L3MBTL1Q9Y468 752 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 WDR45Q9Y484 360 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 CACNA1DQ01668 2161 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 CRYBG3Q68DQ2 2970 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 SERINC4A6NH21 518 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 FIGNL2A6NMB9 653 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 AHRRA9YTQ3 701 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 CLIC1O00299 241 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 FBP2O00757 339 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 HCRTR2O43614 444 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 SOX30O94993 753 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 ANP32DO95626 131 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 EPPINO95925 133 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 AK1P00568 194 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 TFPTP0C1Z6 253 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 LINGO3P0C6S8 592 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 GP1BBP13224 206 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 HPGDP15428 266 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 CHMP24386 653 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 SHC1P29353 583 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 ARFIP2P53365 341 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 SEC24CP53992 1094 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 RGNQ15493 299 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 GPAT3Q53EU6 434 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 RPS26P11Q5JNZ5 115 aaPredicted RBP12.55□□□□□ -0.4
TPM1-230ENST00000561266 RAET1LQ5VY80 246 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 POMZP3Q6PJE2 187 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 ADGRE4PQ86SQ3 457 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 ZNF619Q8N2I2 560 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 TRIML2Q8N7C3 387 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 C9orf106Q8NAJ2 232 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 GPR119Q8TDV5 335 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 HOXD1Q9GZZ0 328 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 SAR1AQ9NR31 198 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 PKDREJQ9NTG1 2253 aa12.55□□□□□ -0.4
TPM1-230ENST00000561266 A0A1W2PP18 115 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 NKX2-6A6NCS4 301 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 KRT75O95678 551 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 GUSBP08236 651 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 GABRA1P14867 456 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 MSX1P28360 303 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 PGM1P36871 562 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 CRATP43155 626 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 SKP2Q13309 424 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 SELPLGQ14242 412 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 FGFBP1Q14512 234 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 GANABQ14697 944 aaKnown RBP12.54□□□□□ -0.4
TPM1-230ENST00000561266 ATAD3BQ5T9A4 648 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 ZNF787Q6DD87 383 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 TMEM211Q6ICI0 200 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 MTFR2Q6P444 385 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 XKRXQ6PP77 449 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 MTERF4Q7Z6M4 381 aaKnown RBP12.54□□□□□ -0.4
TPM1-230ENST00000561266 UBQLNLQ8IYU4 475 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 SLC38A5Q8WUX1 472 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 RND1Q92730 232 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 MAL2Q969L2 176 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 RNF145Q96MT1 663 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 TRNT1Q96Q11 434 aaKnown RBP12.54□□□□□ -0.4
TPM1-230ENST00000561266 TRIB1Q96RU8 372 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 SIKE1Q9BRV8 207 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 PTGES2Q9H7Z7 377 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 CHST2Q9Y4C5 530 aa12.54□□□□□ -0.4
TPM1-230ENST00000561266 ADGRG4Q8IZF6 3080 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 CLCA1A8K7I4 914 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 PRSS44E7EML9 344 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 H3BML4 177 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 DNAJA2O60884 412 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 CLDN14O95500 239 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 TGM6O95932 706 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 AGR2O95994 175 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 TROVE2P10155 538 aaKnown RBP eCLIP12.53□□□□□ -0.4
TPM1-230ENST00000561266 NR2F1P10589 423 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 AGAP20933 346 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 RPS4Y1P22090 263 aaKnown RBP12.53□□□□□ -0.4
TPM1-230ENST00000561266 HTR1EP28566 365 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 CEACAM8P31997 349 aaPredicted RBP12.53□□□□□ -0.4
TPM1-230ENST00000561266 P2RX1P51575 399 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 AGFG1P52594 562 aaKnown RBP12.53□□□□□ -0.4
TPM1-230ENST00000561266 SMSP52788 366 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 DSTNP60981 165 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 FOXF1Q12946 379 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 KLF10Q13118 480 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 ART3Q13508 389 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 ZNF630Q2M218 657 aaPredicted RBP12.53□□□□□ -0.4
TPM1-230ENST00000561266 CTU2Q2VPK5 515 aaKnown RBP12.53□□□□□ -0.4
TPM1-230ENST00000561266 GLYR1Q49A26 553 aaPredicted RBP12.53□□□□□ -0.4
TPM1-230ENST00000561266 RUNDC3AQ59EK9 446 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 METTL21CQ5VZV1 264 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 NSUN5P2Q63ZY6 315 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 LRRC74BQ6ZQY2 392 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 GGNQ86UU5 652 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 MISPQ8IVT2 679 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 PM20D2Q8IYS1 436 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 GTPBP8Q8N3Z3 284 aaPredicted RBP12.53□□□□□ -0.4
TPM1-230ENST00000561266 ZNF527Q8NB42 609 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 FAM71CQ8NEG0 241 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 OR10Q1Q8NGQ4 319 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 ZPLD1Q8TCW7 415 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms