RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 ETS2P15036 469 aa19.78■□□□□ 0.76
SNX1-210ENST00000560260 ENDOUP21128 410 aaKnown RBP19.78■□□□□ 0.76
SNX1-210ENST00000560260 TCEA1P23193 301 aaKnown RBP19.78■□□□□ 0.76
SNX1-210ENST00000560260 SRD5A2P31213 254 aa19.78■□□□□ 0.76
SNX1-210ENST00000560260 EEFSECP57772 596 aaKnown RBP19.78■□□□□ 0.76
SNX1-210ENST00000560260 EEF1A1P68104 462 aaKnown RBP19.78■□□□□ 0.76
SNX1-210ENST00000560260 KCNJ10P78508 379 aa19.78■□□□□ 0.76
SNX1-210ENST00000560260 FOXK1P85037 733 aa19.78■□□□□ 0.76
SNX1-210ENST00000560260 C19orf57Q0VDD7 668 aa19.78■□□□□ 0.76
SNX1-210ENST00000560260 IGFBP7Q16270 282 aa19.78■□□□□ 0.76
SNX1-210ENST00000560260 MRPL2Q5T653 305 aaKnown RBP19.78■□□□□ 0.76
SNX1-210ENST00000560260 BNC2Q6ZN30 1099 aaPredicted RBP19.78■□□□□ 0.76
SNX1-210ENST00000560260 YRDCQ86U90 279 aaKnown RBP19.78■□□□□ 0.76
SNX1-210ENST00000560260 IFNEQ86WN2 208 aa19.78■□□□□ 0.76
SNX1-210ENST00000560260 OR2T12Q8NG77 320 aa19.78■□□□□ 0.76
SNX1-210ENST00000560260 B4GALNT2Q8NHY0 566 aa19.78■□□□□ 0.76
SNX1-210ENST00000560260 C1GALT1C1Q96EU7 318 aa19.78■□□□□ 0.76
SNX1-210ENST00000560260 NPAS1Q99742 590 aa19.78■□□□□ 0.76
SNX1-210ENST00000560260 SPAG4Q9NPE6 437 aa19.78■□□□□ 0.76
SNX1-210ENST00000560260 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.78■□□□□ 0.76
SNX1-210ENST00000560260 DNAJB12Q9NXW2 375 aaKnown RBP19.78■□□□□ 0.76
SNX1-210ENST00000560260 FREM3P0C091 2139 aa19.78■□□□□ 0.76
SNX1-210ENST00000560260 H3BNH8 94 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 ZNF264O43296 627 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 CDC40O60508 579 aaKnown RBP eCLIP19.77■□□□□ 0.762e-6■■■■■ 31.7
SNX1-210ENST00000560260 TRAPPC6AO75865 159 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 EPPINO95925 133 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 THBS1P07996 1170 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 PABPC4LP0CB38 370 aaKnown RBP19.77■□□□□ 0.76
SNX1-210ENST00000560260 EDN3P14138 238 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 DPP4P27487 766 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 MXRA7P84157 204 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 TOMM20Q15388 145 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 LIN52Q52LA3 116 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 WIPI1Q5MNZ9 446 aaPredicted RBP19.77■□□□□ 0.76
SNX1-210ENST00000560260 C6orf89Q6UWU4 347 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 ARSKQ6UWY0 536 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 TRILQ7L0X0 811 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 EIF3MQ7L2H7 374 aaKnown RBP19.77■□□□□ 0.76
SNX1-210ENST00000560260 MICU2Q8IYU8 434 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 CLIP4Q8N3C7 705 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 RLIMQ9NVW2 624 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 SEC14L3Q9UDX4 400 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 AP3M1Q9Y2T2 418 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 SVILO95425 2214 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 ZNF407Q9C0G0 2248 aa19.77■□□□□ 0.76
SNX1-210ENST00000560260 PRORSD1PA6NEY8 169 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 GTPBP1O00178 669 aaKnown RBP19.76■□□□□ 0.75
SNX1-210ENST00000560260 ZIC3O60481 467 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 TPST1O60507 370 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 WISP1O95388 367 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 OPN1SWP03999 348 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 IL7RP16871 459 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 P2RX1P51575 399 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 DSCR4P56555 118 aaPredicted RBP19.76■□□□□ 0.75
SNX1-210ENST00000560260 DMTNQ08495 405 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 SLC10A1Q14973 349 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 TOMM34Q15785 309 aaPredicted RBP19.76■□□□□ 0.75
SNX1-210ENST00000560260 GLIPR1L2Q4G1C9 344 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 ERICH5Q6P6B1 374 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 LSRQ86X29 649 aaPredicted RBP19.76■□□□□ 0.75
SNX1-210ENST00000560260 CMIPQ8IY22 773 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 DEFB107AQ8IZN7 70 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 TMCO5AQ8N6Q1 288 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 RNF148Q8N7C7 305 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 TAMM41Q96BW9 452 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 LAT2Q9GZY6 243 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 ALG2Q9H553 416 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 ACKR4Q9NPB9 350 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 SPRR3Q9UBC9 169 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 DKKL1Q9UK85 242 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 SLC35A3Q9Y2D2 325 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 HEATR5AQ86XA9 2040 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 CDHR4A6H8M9 788 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 ANKUB1A6NFN9 424 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 SHISA8B8ZZ34 492 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 PYCARD-AS1I3L0S3 204 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 EIF4E2O60573 245 aaKnown RBP19.76■□□□□ 0.75
SNX1-210ENST00000560260 CYP7B1O75881 506 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 MFN2O95140 757 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 MSX1P28360 303 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 MNAT1P51948 309 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 B3GALT5-AS1P59052 145 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 MRPL49Q13405 166 aaKnown RBP19.76■□□□□ 0.75
SNX1-210ENST00000560260 VEZF1Q14119 521 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 ZNF311Q5JNZ3 666 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 RNF220Q5VTB9 566 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 C16orf89Q6UX73 402 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 CCDC80Q76M96 950 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 SLC30A8Q8IWU4 369 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 GHDCQ8N2G8 530 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 ST6GALNAC3Q8NDV1 305 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 MED17Q9NVC6 651 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 TAS2R10Q9NYW0 307 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 ADA2Q9NZK5 511 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 VDAC3Q9Y277 283 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 SLC6A5Q9Y345 797 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 IFT52Q9Y366 437 aa19.76■□□□□ 0.75
SNX1-210ENST00000560260 MED12Q93074 2177 aa19.75■□□□□ 0.75
SNX1-210ENST00000560260 TRGV5A0A0B4J1U4 118 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms