RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 NTNG1Q9Y2I2 539 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 CAB39Q9Y376 341 aaPredicted RBP7.5□□□□□ -1.21
SMAD3-212ENST00000559937 MED31Q9Y3C7 131 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 CMAHPQ9Y471 501 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 A0A0B4J2E0 115 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 CENPVL1A0A0U1RR11 272 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 A0A1B0GX12 115 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 GXYLT2A0PJZ3 443 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 SLC22A31A6NKX4 558 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 NPIPB9F8W1W9 429 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 J3QRE1 110 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 CLDN4O14493 209 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 CTDSP2O14595 271 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 CDC42EP2O14613 210 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF749O43361 778 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 OR10H2O60403 315 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 CTNSO60931 367 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 RDH16O75452 317 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 KCNK2O95069 426 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 CDRT1O95170 752 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 HLA-DPB1P04440 258 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 ZGLP1P0C6A0 271 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 IFI30P13284 250 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 S1PR1P21453 382 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 GABRA3P34903 492 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 RNF144AP50876 292 aaPredicted RBP7.49□□□□□ -1.21
SMAD3-212ENST00000559937 PPP3R1P63098 170 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 HOXC5Q00444 222 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 DNASE1L3Q13609 305 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 FAM53BQ14153 422 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 EXOSC7Q15024 291 aaKnown RBP7.49□□□□□ -1.21
SMAD3-212ENST00000559937 ELOCQ15369 112 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 TRAM1Q15629 374 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 FLYWCH1Q4VC44 716 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 TMEM31Q5JXX7 168 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 CLEC12AQ5QGZ9 265 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 OR2G6Q5TZ20 316 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 NIPAL3Q6P499 406 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 MED25Q71SY5 747 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 MEPCEQ7L2J0 689 aaKnown RBP7.49□□□□□ -1.21
SMAD3-212ENST00000559937 BMP8AQ7Z5Y6 402 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 GKN2Q86XP6 184 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 SNX29P2Q8IUI4 249 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF440Q8IYI8 595 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 LSMEM1Q8N8F7 131 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 SIMC1Q8NDZ2 872 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 FAM83FQ8NEG4 500 aaPredicted RBP7.49□□□□□ -1.21
SMAD3-212ENST00000559937 OR52R1Q8NGF1 315 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 OR5T3Q8NGG3 340 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 ASB15Q8WXK1 588 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 BPIFA2Q96DR5 249 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 TRMT61AQ96FX7 289 aaKnown RBP7.49□□□□□ -1.21
SMAD3-212ENST00000559937 TXNDC15Q96J42 360 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 KCNS3Q9BQ31 491 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 ORAI3Q9BRQ5 295 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF649Q9BS31 505 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF426Q9BUY5 554 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 LRRC61Q9BV99 259 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 GPR174Q9BXC1 333 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 DPH1Q9BZG8 443 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 HINT3Q9NQE9 182 aaKnown RBP7.49□□□□□ -1.21
SMAD3-212ENST00000559937 ENAMQ9NRM1 1142 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 CMC2Q9NRP2 79 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 SNTG1Q9NSN8 517 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 TNFRSF10DQ9UBN6 386 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 EPHA6Q9UF33 1036 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 CLCA2Q9UQC9 943 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 SIGLEC7Q9Y286 467 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 CARD8Q9Y2G2 431 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 GPR52Q9Y2T5 361 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 GRIP1Q9Y3R0 1128 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 V9GYH0 126 aa7.49□□□□□ -1.21
SMAD3-212ENST00000559937 IGHV1OR15-9A0A0B4J2B8 117 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 EFCAB7A8K855 629 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 B4DGG1 531 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PRR23D1E9PI22 279 aaPredicted RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 SGK494L7N484 410 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 WWP2O00308 870 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PEX12O00623 359 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 SEC14L5O43304 696 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 AQP9O43315 295 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 HRO43593 1189 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 FOXS1O43638 330 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PRAMEF2O60811 474 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PTP4A3O75365 173 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PPM1BO75688 479 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 IGF2P01344 180 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 CSF2P04141 144 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PROS1P07225 676 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 CELA2BP08218 269 aaPredicted RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PRR23D2P0DMB1 279 aaPredicted RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 SRFP11831 508 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PRG2P13727 222 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 NME1P15531 152 aaKnown RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 HK1P19367 917 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 MAKP20794 623 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 TBXA2RP21731 343 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PAICSP22234 425 aaKnown RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 GTF2E2P29084 291 aaKnown RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 SLC6A6P31641 620 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms