RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 STX11O75558 287 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 UGT2B17O75795 530 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 CYP7B1O75881 506 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 NUDT14O95848 222 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 IL6P05231 212 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 TMIGD3P0DMS9 266 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 PEPDP12955 493 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 MSX1P28360 303 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 ZNF41P51814 821 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 DLX5P56178 289 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 FOXF1Q12946 379 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 SF3B4Q15427 424 aaKnown RBP eCLIP13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 TOMM34Q15785 309 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 SYPL1Q16563 259 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 GPAT3Q53EU6 434 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 ATAD3BQ5T9A4 648 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 TYW3Q6IPR3 259 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 SLC2A7Q6PXP3 512 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 GRAMD2AQ8IUY3 354 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 MISPQ8IVT2 679 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 ZNF295-AS1Q8N0V1 137 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 MEIOBQ8N635 442 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 ANKFN1Q8N957 763 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 ZNF527Q8NB42 609 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 FIG4Q92562 907 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 INTS12Q96CB8 462 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 ZG16BQ96DA0 208 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 AURKBQ96GD4 344 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 TRIM8Q9BZR9 551 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 ZNF350Q9GZX5 532 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 HOXD1Q9GZZ0 328 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 ENKD1Q9H0I2 346 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 QRSL1Q9H0R6 528 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 ICAM5Q9UMF0 924 aa13.38□□□□□ -0.27
RABGGTA-211ENST00000559850 FAM234BA2RU67 622 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 SERINC4A6NH21 518 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 FAM47E-STBD1D6RA91 191 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 TGDSO95455 350 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 ANP32DO95626 131 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 UBL4AP11441 157 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 SHC1P29353 583 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 CCR4P51679 360 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 STX1BP61266 288 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 CHRNEQ04844 493 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 SF3A3Q12874 501 aaKnown RBP eCLIP13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 BCL2A1Q16548 175 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 GLYR1Q49A26 553 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 C6orf10Q5SRN2 563 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 PPP4R4Q6NUP7 873 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 FRRS1Q6ZNA5 592 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 P4HA3Q7Z4N8 544 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 ADGRE4PQ86SQ3 457 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 GGNQ86UU5 652 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 FUNDC1Q8IVP5 155 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 CCDC28BQ9BUN5 200 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 PINK1Q9BXM7 581 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 NPHS2Q9NP85 383 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 DCTN4Q9UJW0 460 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 WDR45Q9Y484 360 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 PKDREJQ9NTG1 2253 aa13.37□□□□□ -0.27
RABGGTA-211ENST00000559850 A0A087WZY1 265 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 CLDN24A6NM45 220 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 H3BNH8 94 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 NR5A2O00482 541 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 EIF1AYO14602 144 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 DVL2O14641 736 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 ZNF264O43296 627 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 EFNA2O43921 213 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 KIAA0513O60268 411 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 H6PDO95479 791 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 AK1P00568 194 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 CHRM4P08173 479 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 LINGO3P0C6S8 592 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 ETFAP13804 333 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 IGFBP2P18065 325 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 CTSSP25774 331 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 PSMA4P25789 261 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 UQCRC1P31930 480 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 P2RX1P51575 399 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 ZNF141Q15928 474 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 SLC25A35Q3KQZ1 300 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 CHMP1BQ7LBR1 199 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 MTERF4Q7Z6M4 381 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 GTPBP8Q8N3Z3 284 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 TRIML2Q8N7C3 387 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 ATP6V1C2Q8NEY4 427 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 FBXO27Q8NI29 283 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 ZFP90Q8TF47 636 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 WNT2BQ93097 391 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 ZBTB8AQ96BR9 441 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 ITCHQ96J02 903 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 SPOCK3Q9BQ16 436 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 NMUR2Q9GZQ4 415 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 ACBD3Q9H3P7 528 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 RUBCNLQ9H714 662 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 CCDC167Q9P0B6 97 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 L3MBTL1Q9Y468 752 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 AP4B1Q9Y6B7 739 aa13.36□□□□□ -0.27
RABGGTA-211ENST00000559850 UQCRHLA0A096LP55 91 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 SLC22A20A6NK97 555 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms