RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 UTP11Q9Y3A2 253 aaKnown RBP9.52□□□□□ -0.89
TRAF3-207ENST00000559734 FKBP7Q9Y680 259 aa9.52□□□□□ -0.89
TRAF3-207ENST00000559734 UPK1AO00322 258 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 PPP6CO00743 305 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 SMIM24O75264 130 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 OXSR1O95747 527 aaPredicted RBP9.51□□□□□ -0.89
TRAF3-207ENST00000559734 OTCP00480 354 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 IGKV1D-16P01601 117 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 BMP4P12644 408 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 HPGDP15428 266 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 CHN1P15882 459 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 IGHV1-2P23083 117 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 STX2P32856 288 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 OR3A2P47893 321 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 PLTPP55058 493 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 CDH13P55290 713 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 CAV1Q03135 178 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 CHRNB3Q05901 458 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 BTKQ06187 659 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 TRADDQ15628 312 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 TECRLQ5HYJ1 363 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 METTL2BQ6P1Q9 378 aaKnown RBP9.51□□□□□ -0.89
TRAF3-207ENST00000559734 KLHL17Q6TDP4 642 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 ZDHHC24Q6UX98 284 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 SZRD1Q7Z422 152 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 TRABD2AQ86V40 505 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 C3orf56Q8N813 242 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 FBXO30Q8TB52 745 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 FBXO25Q8TCJ0 367 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 GPR151Q8TDV0 419 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 FBF1Q8TES7 1133 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 C16orf78Q8WTQ4 265 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 ZMYND19Q96E35 227 aaPredicted RBP9.51□□□□□ -0.89
TRAF3-207ENST00000559734 KLHDC3Q9BQ90 382 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 LMF2Q9BU23 707 aaKnown RBP9.51□□□□□ -0.89
TRAF3-207ENST00000559734 C1QTNF6Q9BXI9 259 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 RAB17Q9H0T7 212 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 CXorf36Q9H7Y0 433 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 KLHL9Q9P2J3 617 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 C19orf53Q9UNZ5 99 aaPredicted RBP9.51□□□□□ -0.89
TRAF3-207ENST00000559734 PMF1-BGLAPU3KQ54 211 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 PCNX3Q9H6A9 2034 aa9.51□□□□□ -0.89
TRAF3-207ENST00000559734 FREM1Q5H8C1 2179 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 A0A087WV62 115 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 CIB4A0PJX0 185 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 CCDC189A1A4V9 331 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 C7orf72A4D263 438 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 OR5H1A6NKK0 313 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 GJE1A6NN92 205 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 ALG1L2C9J202 215 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 STX16-NPEPL1H3BU86 382 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 STX16O14662 325 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 OR4F21O95013 312 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 NUDT14O95848 222 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 IGHV3-9P01782 118 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 EGR1P18146 543 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 ENPP1P22413 925 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 EDNRAP25101 427 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 PTAFRP25105 342 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 CD40P25942 277 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 TYK2P29597 1187 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 NTSP30990 170 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 RNF144AP50876 292 aaPredicted RBP9.5□□□□□ -0.89
TRAF3-207ENST00000559734 MANFP55145 182 aaKnown RBP9.5□□□□□ -0.89
TRAF3-207ENST00000559734 RAE1P78406 368 aaKnown RBP9.5□□□□□ -0.89
TRAF3-207ENST00000559734 ACSM2AQ08AH3 577 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 C2orf80Q0P641 193 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 SLC29A2Q14542 456 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 TMEM176BQ3YBM2 270 aaPredicted RBP9.5□□□□□ -0.89
TRAF3-207ENST00000559734 ACSM2BQ68CK6 577 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 ZNF544Q6NX49 715 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 RINLQ6ZS11 566 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 CCDC91Q7Z6B0 441 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 ZNF100Q8IYN0 542 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 PLD6Q8N2A8 252 aaKnown RBP9.5□□□□□ -0.89
TRAF3-207ENST00000559734 UBE2J2Q8N2K1 259 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 MMGT1Q8N4V1 131 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 B4GALNT2Q8NHY0 566 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 FBXO17Q96EF6 278 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 APIPQ96GX9 242 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 FOXN4Q96NZ1 517 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 ZNF300Q96RE9 604 aaPredicted RBP9.5□□□□□ -0.89
TRAF3-207ENST00000559734 INPP5KQ9BT40 448 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 MIEF1Q9NQG6 463 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 NFU1Q9UMS0 254 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 TRAF6Q9Y4K3 522 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 MALRD1Q5VYJ5 2156 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 YLPM1P49750 1951 aaKnown RBP9.5□□□□□ -0.89
TRAF3-207ENST00000559734 CADP27708 2225 aa9.5□□□□□ -0.89
TRAF3-207ENST00000559734 A0A1W2PNR3 127 aa9.49□□□□□ -0.89
TRAF3-207ENST00000559734 LRP5LA4QPB2 252 aa9.49□□□□□ -0.89
TRAF3-207ENST00000559734 CCT8L1PA6NM43 557 aa9.49□□□□□ -0.89
TRAF3-207ENST00000559734 MYO1GB0I1T2 1018 aa9.49□□□□□ -0.89
TRAF3-207ENST00000559734 VWC2LB2RUY7 222 aa9.49□□□□□ -0.89
TRAF3-207ENST00000559734 MANBAO00462 879 aa9.49□□□□□ -0.89
TRAF3-207ENST00000559734 KRT6AP02538 564 aa9.49□□□□□ -0.89
TRAF3-207ENST00000559734 KRT6BP04259 564 aa9.49□□□□□ -0.89
TRAF3-207ENST00000559734 SLC7A1P30825 629 aa9.49□□□□□ -0.89
TRAF3-207ENST00000559734 TIA1P31483 386 aaKnown RBP eCLIP9.49□□□□□ -0.89
TRAF3-207ENST00000559734 MAGEA4P43358 317 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms