RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 OXSR1O95747 527 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 ACAA2P42765 397 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 Q0VFX4 171 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 ENTPD8Q5MY95 495 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 TMPRSS7Q7RTY8 843 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 CROCCP3Q8IVE0 287 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 OR8K3Q8NH51 312 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 SLC7A13Q8TCU3 470 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 HSPBAP1Q96EW2 488 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 MBOAT4Q96T53 435 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 MCHR1Q99705 422 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 B3GNT4Q9C0J1 378 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 IL17BQ9UHF5 180 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 FAM32AQ9Y421 112 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 ZFHX4Q86UP3 3567 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 SERINC4A6NH21 518 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 ATP6V1B1P15313 513 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 OTX2P32243 289 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 POLR2IP36954 125 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 DLSTP36957 453 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 ST13P50502 369 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 PLCXD2Q0VAA5 305 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 BTBD16Q32M84 506 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 ZIK1Q3SY52 487 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 EIPR1Q53HC9 387 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 KDM4DQ6B0I6 523 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 GRAMD2AQ8IUY3 354 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 ERI1Q8IV48 349 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 SLC5A8Q8N695 610 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 GATSQ8NAP1 163 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 TFAP2CQ92754 450 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 NKD1Q969G9 470 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 ALPK1Q96QP1 1244 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 TBCCD1Q9NVR7 557 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 SMPD3Q9NY59 655 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 CNTRLQ7Z7A1 2325 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 HPRP00739 348 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 H1F0P07305 194 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 GNAO1P09471 354 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 TGIF1Q15583 401 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 MICAQ29983 383 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 COLEC12Q5KU26 742 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 PLAG1Q6DJT9 500 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 DTX1Q86Y01 620 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 CHERPQ8IWX8 916 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 OFCC1Q8IZS5 231 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 FAM71CQ8NEG0 241 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 ADAMTS16Q8TE57 1224 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 FEVQ99581 238 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 RBM4BQ9BQ04 359 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 RBM4Q9BWF3 364 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 TRIM45Q9H8W5 580 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 ZNF160Q9HCG1 818 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 UBQLN4Q9NRR5 601 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 RHBDL2Q9NX52 303 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 KLHL28Q9NXS3 571 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 MYOTQ9UBF9 498 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 PCDHGA6Q9Y5G7 932 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 NPFFR2Q9Y5X5 522 aa13.12□□□□□ -0.31
RABGGTA-209ENST00000559551 B4DXG7 233 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 STMND1H3BQB6 276 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 AP3D1O14617 1153 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 HS6ST1O60243 411 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 CLIC3O95833 236 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 TBXA2RP21731 343 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 CBLP22681 906 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 ADARB1P78563 741 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 CAMK2BQ13554 666 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 SSPNQ14714 243 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 PODNL1Q6PEZ8 512 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 WDR88Q6ZMY6 472 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 NDUFAF7Q7L592 441 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 NKAIN4Q8IVV8 208 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 POGLUT1Q8NBL1 392 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 OR10G2Q8NGC3 310 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 ADAMTS17Q8TE56 1095 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 GIPC3Q8TF64 312 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 NIPSNAP1Q9BPW8 284 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 PRSS27Q9BQR3 290 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 ADI1Q9BV57 179 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 C8orf4Q9NR00 106 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 RSL24D1Q9UHA3 163 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 SLC13A4Q9UKG4 626 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 CEPT1Q9Y6K0 416 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 A0A1W2PRQ8 180 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 FADS1O60427 444 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 ZFAND5O76080 213 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 IGHEP01854 428 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 THRBP10828 461 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 CDH2P19022 906 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 EPHA2P29317 976 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 PNLIPRP2P54317 469 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 PSMD4P55036 377 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 FBXW4P57775 412 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 RPS15P62841 145 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 MERTKQ12866 999 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 DGCR6Q14129 220 aa13.11□□□□□ -0.31
RABGGTA-209ENST00000559551 SLC36A3Q495N2 470 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms