RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 SH3GL2Q99962 352 aa6.63□□□□□ -1.35
SPG11-213ENST00000558988 RBM24Q9BX46 236 aaKnown RBP6.63□□□□□ -1.35
SPG11-213ENST00000558988 DSN1Q9H410 356 aa6.63□□□□□ -1.35
SPG11-213ENST00000558988 DDX18Q9NVP1 670 aaKnown RBP6.63□□□□□ -1.35
SPG11-213ENST00000558988 PARPBPQ9NWS1 579 aa6.63□□□□□ -1.35
SPG11-213ENST00000558988 TAS2R9Q9NYW1 312 aa6.63□□□□□ -1.35
SPG11-213ENST00000558988 FLRT3Q9NZU0 649 aa6.63□□□□□ -1.35
SPG11-213ENST00000558988 MED11Q9P086 117 aa6.63□□□□□ -1.35
SPG11-213ENST00000558988 EMCNQ9ULC0 261 aa6.63□□□□□ -1.35
SPG11-213ENST00000558988 CBLCQ9ULV8 474 aa6.63□□□□□ -1.35
SPG11-213ENST00000558988 EXO1Q9UQ84 846 aaKnown RBP6.63□□□□□ -1.35
SPG11-213ENST00000558988 EMC9Q9Y3B6 208 aa6.63□□□□□ -1.35
SPG11-213ENST00000558988 X6R8D5 127 aa6.63□□□□□ -1.35
SPG11-213ENST00000558988 LRBAP50851 2863 aa6.63□□□□□ -1.35
SPG11-213ENST00000558988 ANKRD17O75179 2603 aaKnown RBP6.63□□□□□ -1.35
SPG11-213ENST00000558988 DOCK7Q96N67 2140 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 MBD3L4A6NDZ8 208 aaPredicted RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 MBD3L3A6NE82 208 aaPredicted RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 OR6C70A6NIJ9 312 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 MBD3L5A6NJ08 208 aaPredicted RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 CD8B2A6NJW9 211 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 G3V2L1 256 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 H3BML4 177 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 SYT5O00445 386 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 PLOD2O00469 737 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 COPEO14579 308 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 TO15178 435 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 COQ9O75208 318 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 SEC22BO75396 215 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 BCAS2O75934 225 aaPredicted RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 CT45A8P0DMV1 189 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 CT45A9P0DMV2 189 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 NAT2P11245 290 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 HK1P19367 917 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 DDCP20711 480 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 DNASE1P24855 282 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 SRD5A2P31213 254 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 OPRM1P35372 400 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 PRKAG1P54619 331 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 PPP2R2AP63151 447 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 FOXL1Q12952 345 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 SNTA1Q13424 505 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 KEAP1Q14145 624 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 EFR3AQ14156 821 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 TESK1Q15569 626 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 ZNHIT3Q15649 155 aaPredicted RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 GALNTL6Q49A17 601 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 CT45A2Q5DJT8 189 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 GTF2IRD2BQ6EKJ0 949 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 AAGABQ6PD74 315 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 ZNF551Q7Z340 670 aaPredicted RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 GTF2IRD2Q86UP8 949 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 LCA5Q86VQ0 697 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 KIF18BQ86Y91 864 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 SAMD14Q8IZD0 417 aaPredicted RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 GATSQ8NAP1 163 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 MBD3L2Q8NHZ7 208 aaPredicted RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 FAM222BQ8WU58 562 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 SLC9A6Q92581 669 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 CIDECQ96AQ7 238 aaPredicted RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 TRIM44Q96DX7 344 aaPredicted RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 OTUB1Q96FW1 271 aaPredicted RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 CHMP6Q96FZ7 201 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 SLC35A4Q96G79 324 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 EGLN2Q96KS0 407 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 VSTM2LQ96N03 204 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 TSSK3Q96PN8 268 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 FAM111AQ96PZ2 611 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 BTBD9Q96Q07 612 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 OR2B2Q9GZK3 357 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 IQCGQ9H095 443 aaKnown RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 GLIPR2Q9H4G4 154 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 CALHM2Q9HA72 323 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 RRAGDQ9NQL2 400 aaPredicted RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 RASSF1Q9NS23 344 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 GALNT8Q9NY28 637 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 ZNF629Q9UEG4 869 aaPredicted RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 DCDC2Q9UHG0 476 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 PCDHGB3Q9Y5G1 929 aa6.62□□□□□ -1.35
SPG11-213ENST00000558988 PRRC2AP48634 2157 aaKnown RBP6.62□□□□□ -1.35
SPG11-213ENST00000558988 PDZD2O15018 2839 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 NBPF19A0A087WUL8 3843 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 GXYLT2A0PJZ3 443 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 SLC22A20A6NK97 555 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 H0YC42 278 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 UPK1AO00322 258 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 PLOD3O60568 738 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 TSPAN2O60636 221 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 PLIN3O60664 434 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 TGM6O95932 706 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 OPN1LWP04000 364 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 LINC00032P0C843 101 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 CD99P14209 185 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 CPA3P15088 417 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 GABRA3P34903 492 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 EVI2BP34910 448 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 KCNJ5P48544 419 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 LHX2P50458 406 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 PNLIPRP2P54317 469 aa6.61□□□□□ -1.35
SPG11-213ENST00000558988 TPD52P55327 224 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms