RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 PIPOXQ9P0Z9 390 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 DHRS4-AS1Q9P1J3 65 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 CHRNA9Q9UGM1 479 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 L3MBTL1Q9Y468 752 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 MMP24Q9Y5R2 645 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 FRMPD4Q14CM0 1322 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 METP08581 1390 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 KDRP35968 1356 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 KANK1Q14678 1352 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 A0A1B0GU03 582 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 SAGE2PA6NJ88 616 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 TMEM110-MUSTN1A8MSY1 372 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 RIPK2O43353 540 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 ZNF253O75346 499 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 CABYRO75952 493 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 NEBLO76041 1014 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 UMPSP11172 480 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 CAPN2P17655 700 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 CALB2P22676 271 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 PAX7P23759 505 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 YWHABP31946 246 aaKnown RBP3.42□□□□□ -1.86
CASC4-206ENST00000558847 HMGCLP35914 325 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 BDKRB1P46663 353 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 EWSR1Q01844 656 aaKnown RBP eCLIP3.42□□□□□ -1.86
CASC4-206ENST00000558847 SERTAD2Q14140 314 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 LAGE3Q14657 143 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 QRICH1Q2TAL8 776 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 C15orf32Q32M92 178 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 ATF7IP2Q5U623 682 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 ZNF57Q68EA5 555 aaPredicted RBP3.42□□□□□ -1.86
CASC4-206ENST00000558847 PYHIN1Q6K0P9 492 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 NLRP9Q7RTR0 991 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 C9orf40Q8IXQ3 194 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 LRRC43Q8N309 656 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 MTURNQ8N3F0 131 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 OR9A4Q8NGU2 314 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 M1APQ8TC57 530 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 MRPS31Q92665 395 aaKnown RBP3.42□□□□□ -1.86
CASC4-206ENST00000558847 C12orf66Q96MD2 445 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 TGM7Q96PF1 710 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 DPH7Q9BTV6 452 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 TM2D1Q9BX74 207 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 VCX2Q9H322 139 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 SMYD3Q9H7B4 428 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 SLC2A6Q9UGQ3 507 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 PCSK1NQ9UHG2 260 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 ZNF221Q9UK13 617 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 RASD1Q9Y272 281 aa3.42□□□□□ -1.86
CASC4-206ENST00000558847 COL5A2P05997 1499 aaPredicted RBP3.41□□□□□ -1.86
CASC4-206ENST00000558847 ARPC3O15145 178 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 NUDT21O43809 227 aaKnown RBP3.41□□□□□ -1.86
CASC4-206ENST00000558847 DUSP14O95147 198 aaKnown RBP3.41□□□□□ -1.86
CASC4-206ENST00000558847 GATA1P15976 413 aaPredicted RBP3.41□□□□□ -1.86
CASC4-206ENST00000558847 BCL3P20749 454 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 UQCRC2P22695 453 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 IGHV1-2P23083 117 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 HPCAL1P37235 193 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 SLC25A1P53007 311 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 IST1P53990 364 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 OC90Q02509 493 aaPredicted RBP3.41□□□□□ -1.86
CASC4-206ENST00000558847 MAP2K1Q02750 393 aaPredicted RBP3.41□□□□□ -1.86
CASC4-206ENST00000558847 RUNX3Q13761 415 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 TGIF1Q15583 401 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 Q1RN00 199 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 TIMM50Q3ZCQ8 353 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 GLYR1Q49A26 553 aaPredicted RBP3.41□□□□□ -1.86
CASC4-206ENST00000558847 FILIP1LQ4L180 1135 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 SLC22A6Q4U2R8 563 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 BEND3Q5T5X7 828 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 OR5M10Q6IEU7 315 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 PMF1Q6P1K2 205 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 CCDC80Q76M96 950 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 SLC39A11Q8N1S5 342 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 ZCCHC7Q8N3Z6 543 aaKnown RBP3.41□□□□□ -1.86
CASC4-206ENST00000558847 TRPV1Q8NER1 839 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 CCDC26Q8TAB7 109 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 SHC3Q92529 594 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 N4BP2L2Q92802 583 aaPredicted RBP3.41□□□□□ -1.86
CASC4-206ENST00000558847 AMDHD1Q96NU7 426 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 MYCBPQ99417 103 aaPredicted RBP3.41□□□□□ -1.86
CASC4-206ENST00000558847 ZBTB18Q99592 522 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 CITED1Q99966 193 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 NXF5Q9H1B4 397 aaKnown RBP3.41□□□□□ -1.86
CASC4-206ENST00000558847 UFSP2Q9NUQ7 469 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 WRAP73Q9P2S5 460 aaPredicted RBP3.41□□□□□ -1.86
CASC4-206ENST00000558847 RSPH14Q9UHP6 348 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 PCNX3Q9H6A9 2034 aa3.41□□□□□ -1.86
CASC4-206ENST00000558847 CACNA1FO60840 1977 aa3.4□□□□□ -1.86
CASC4-206ENST00000558847 A0A087WWV3 80 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 IGHV2-70DA0A0C4DH43 119 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 CCT8L1PA6NM43 557 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 SAP18O00422 153 aaKnown RBP3.4□□□□□ -1.87
CASC4-206ENST00000558847 CXCL11O14625 94 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 PHF1O43189 567 aaPredicted RBP3.4□□□□□ -1.87
CASC4-206ENST00000558847 VENTXO95231 258 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 F10P00742 488 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 IGHG3P01860 377 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 PNMTP11086 282 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 HNF1AP20823 631 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 IMPDH1P20839 514 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms