RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 PPM1MQ96MI6 270 aa3□□□□□ -1.93
HERC1-203ENST00000558532 LINC00052Q96N35 136 aa3□□□□□ -1.93
HERC1-203ENST00000558532 FOPNLQ96NB1 174 aa3□□□□□ -1.93
HERC1-203ENST00000558532 OR2M2Q96R28 347 aa3□□□□□ -1.93
HERC1-203ENST00000558532 TAAR1Q96RJ0 339 aa3□□□□□ -1.93
HERC1-203ENST00000558532 KCNA7Q96RP8 456 aa3□□□□□ -1.93
HERC1-203ENST00000558532 MGLLQ99685 303 aa3□□□□□ -1.93
HERC1-203ENST00000558532 APOL2Q9BQE5 337 aa3□□□□□ -1.93
HERC1-203ENST00000558532 CHCHD6Q9BRQ6 235 aa3□□□□□ -1.93
HERC1-203ENST00000558532 TMEM43Q9BTV4 400 aa3□□□□□ -1.93
HERC1-203ENST00000558532 ZNF416Q9BWM5 594 aa3□□□□□ -1.93
HERC1-203ENST00000558532 LDHAL6BQ9BYZ2 381 aaPredicted RBP3□□□□□ -1.93
HERC1-203ENST00000558532 CDT1Q9H211 546 aa3□□□□□ -1.93
HERC1-203ENST00000558532 NXF3Q9H4D5 531 aaKnown RBP3□□□□□ -1.93
HERC1-203ENST00000558532 RIBC2Q9H4K1 309 aa3□□□□□ -1.93
HERC1-203ENST00000558532 CLMPQ9H6B4 373 aa3□□□□□ -1.93
HERC1-203ENST00000558532 ALG9Q9H6U8 611 aa3□□□□□ -1.93
HERC1-203ENST00000558532 RNF167Q9H6Y7 350 aa3□□□□□ -1.93
HERC1-203ENST00000558532 MINDY3Q9H8M7 445 aa3□□□□□ -1.93
HERC1-203ENST00000558532 TRIM45Q9H8W5 580 aaPredicted RBP3□□□□□ -1.93
HERC1-203ENST00000558532 SLC25A19Q9HC21 320 aa3□□□□□ -1.93
HERC1-203ENST00000558532 ISYNA1Q9NPH2 558 aa3□□□□□ -1.93
HERC1-203ENST00000558532 PNRC2Q9NPJ4 139 aaKnown RBP3□□□□□ -1.93
HERC1-203ENST00000558532 EQTNQ9NQ60 294 aa3□□□□□ -1.93
HERC1-203ENST00000558532 G6PC2Q9NQR9 355 aa3□□□□□ -1.93
HERC1-203ENST00000558532 PCDHB16Q9NRJ7 776 aa3□□□□□ -1.93
HERC1-203ENST00000558532 KRT84Q9NSB2 600 aa3□□□□□ -1.93
HERC1-203ENST00000558532 ABCC13Q9NSE7 274 aa3□□□□□ -1.93
HERC1-203ENST00000558532 RNF146Q9NTX7 359 aa3□□□□□ -1.93
HERC1-203ENST00000558532 ZNF226Q9NYT6 803 aa3□□□□□ -1.93
HERC1-203ENST00000558532 MBD2Q9UBB5 411 aa3□□□□□ -1.93
HERC1-203ENST00000558532 PLEKHB1Q9UF11 243 aaPredicted RBP3□□□□□ -1.93
HERC1-203ENST00000558532 UBQLN2Q9UHD9 624 aa3□□□□□ -1.93
HERC1-203ENST00000558532 ENOPH1Q9UHY7 261 aa3□□□□□ -1.93
HERC1-203ENST00000558532 PCTPQ9UKL6 214 aa3□□□□□ -1.93
HERC1-203ENST00000558532 ABCG2Q9UNQ0 655 aa3□□□□□ -1.93
HERC1-203ENST00000558532 COPS3Q9UNS2 423 aa3□□□□□ -1.93
HERC1-203ENST00000558532 POFUT2Q9Y2G5 429 aa3□□□□□ -1.93
HERC1-203ENST00000558532 PADI2Q9Y2J8 665 aa3□□□□□ -1.93
HERC1-203ENST00000558532 MAB21L2Q9Y586 359 aa3□□□□□ -1.93
HERC1-203ENST00000558532 V9GYQ6 96 aa3□□□□□ -1.93
HERC1-203ENST00000558532 PLXNB2O15031 1838 aa3□□□□□ -1.93
HERC1-203ENST00000558532 TNS1Q9HBL0 1735 aaKnown RBP2.99□□□□□ -1.93
HERC1-203ENST00000558532 TRPM7Q96QT4 1865 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 ZNF106Q9H2Y7 1883 aaKnown RBP2.99□□□□□ -1.93
HERC1-203ENST00000558532 SCN1AP35498 2009 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 MEIKINA0A087WXM9 373 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 GLYATL1P3A0A0U1RQE8 302 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 A0A0U1RQF3 1178 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 LOC100506127A0A0U1RQW1 187 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 FAM90A8PA6NJQ4 464 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 YDJCA8MPS7 323 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 A8MUA0 341 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 F8W036 122 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 INMT-MINDY4F8WBC2 141 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 FAM72CH0Y354 149 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 BTN3A3O00478 584 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 E2F3O00716 465 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 TNFRSF13BO14836 293 aaPredicted RBP2.99□□□□□ -1.93
HERC1-203ENST00000558532 PER2O15055 1255 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 FABP7O15540 132 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 GATCO43716 136 aaKnown RBP2.99□□□□□ -1.93
HERC1-203ENST00000558532 GMDSO60547 372 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 PLOD3O60568 738 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 CSO75390 466 aaKnown RBP2.99□□□□□ -1.93
HERC1-203ENST00000558532 SIX3O95343 332 aaPredicted RBP2.99□□□□□ -1.93
HERC1-203ENST00000558532 LALBAP00709 142 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 SERPINA1P01009 418 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 IFNA14P01570 189 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 IFNA4P05014 189 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 IL6P05231 212 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 FABP3P05413 133 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 PROS1P07225 676 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 STSP08842 583 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 NMBP08949 121 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 CSF1P09603 554 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 FAM90A13PP0C7W8 464 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 FAM90A24PP0C7X0 464 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 LINC00032P0C843 101 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 SMIM6P0DI80 62 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 SULT1A3P0DMM9 295 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 SULT1A4P0DMN0 295 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 CXCL8P10145 99 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 PRKAR1AP10644 381 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 G6PDP11413 515 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 CYP4B1P13584 511 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 ANXA8P13928 327 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 DARSP14868 501 aaKnown RBP2.99□□□□□ -1.93
HERC1-203ENST00000558532 GPX2P18283 190 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 TSPAN8P19075 237 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 SAT1P21673 171 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 GALP22466 123 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 AZGP1P25311 298 aaKnown RBP2.99□□□□□ -1.93
HERC1-203ENST00000558532 PSMA1P25786 263 aaKnown RBP2.99□□□□□ -1.93
HERC1-203ENST00000558532 AVPR2P30518 371 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 FGF9P31371 208 aaPredicted RBP2.99□□□□□ -1.93
HERC1-203ENST00000558532 BTCP35070 178 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 SULT1E1P49888 294 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 RAB13P51153 203 aa2.99□□□□□ -1.93
HERC1-203ENST00000558532 BLVRAP53004 296 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms