RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 RFXAPO00287 272 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 OSMP13725 252 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 RIPPLY1Q0D2K3 151 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 PDZD11Q5EBL8 140 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 VASH1Q7L8A9 365 aaPredicted RBP13.16□□□□□ -0.3
SPG11-210ENST00000558319 ZC3HAV1LQ96H79 300 aaKnown RBP13.16□□□□□ -0.3
SPG11-210ENST00000558319 OCSTAMPQ9BR26 566 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 B4GALT7Q9UBV7 327 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 SLC7A7Q9UM01 511 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 PTRH2Q9Y3E5 179 aaKnown RBP13.16□□□□□ -0.3
SPG11-210ENST00000558319 ATRNO75882 1429 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 ARHGEF28Q8N1W1 1705 aaKnown RBP13.16□□□□□ -0.3
SPG11-210ENST00000558319 VSTM2BA6NLU5 285 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 MAGEB4O15481 346 aaPredicted RBP13.16□□□□□ -0.3
SPG11-210ENST00000558319 PVRP15151 417 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 EEF1A1P68104 462 aaKnown RBP13.16□□□□□ -0.3
SPG11-210ENST00000558319 DOC2AQ14183 400 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 UGT3A2Q3SY77 523 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 BORAQ6PGQ7 559 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 NAGSQ8N159 534 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 MYH7P12883 1935 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 SERPINA5P05154 406 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 UBBP0CG47 229 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 UBCP0CG48 685 aaKnown RBP13.16□□□□□ -0.3
SPG11-210ENST00000558319 RUNX3Q13761 415 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 APOOLQ6UXV4 268 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 UQCC2Q9BRT2 126 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 KIAA0355O15063 1070 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 CEBPBP17676 345 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 FIGLAQ6QHK4 219 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 CPOQ8IVL8 374 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 SDR9C7Q8NEX9 313 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 LINC01599Q8WXQ3 324 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 CICQ96RK0 1608 aaPredicted RBP13.16□□□□□ -0.3
SPG11-210ENST00000558319 KCNIP1Q9NZI2 227 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 CD207Q9UJ71 328 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 IGKV6D-41A0A0C4DH26 115 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 LOC285095A0A1B0GVY8 99 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 STC2O76061 302 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 CRHBPP24387 322 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 FBXW12Q6X9E4 464 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 FNDC9Q8TBE3 224 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 APIPQ96GX9 242 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 OR14J1Q9UGF5 321 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 TNFSF8P32971 234 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 XCR1P46094 333 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 PAGE3Q5JUK9 113 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 LARP4Q71RC2 724 aaKnown RBP eCLIP13.15□□□□□ -0.3
SPG11-210ENST00000558319 TAS1R1Q7RTX1 841 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 KDM8Q8N371 416 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 TMEM234Q8WY98 164 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 SENP5Q96HI0 755 aaPredicted RBP13.15□□□□□ -0.3
SPG11-210ENST00000558319 RASD1Q9Y272 281 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 ASB4Q9Y574 426 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 ITGB2P05107 769 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 ARSDP51689 593 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 SLC9A3R2Q15599 337 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 EMC10Q5UCC4 262 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 FOXRED1Q96CU9 486 aaPredicted RBP13.15□□□□□ -0.3
SPG11-210ENST00000558319 CHFRQ96EP1 664 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 ZNF416Q9BWM5 594 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 BMP2P12643 396 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 PIN1Q13526 163 aaPredicted RBP13.15□□□□□ -0.3
SPG11-210ENST00000558319 Q6ZSR6 202 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 KLHDC8AQ8IYD2 350 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 MS4A15Q8N5U1 240 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 OR4K5Q8NGD3 323 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 C2CD4CQ8TF44 421 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 HS6ST2Q96MM7 605 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 SLC30A3Q99726 388 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 A0A0A6YYC8 382 aaPredicted RBP13.15□□□□□ -0.3
SPG11-210ENST00000558319 I3L1I5 382 aaPredicted RBP13.15□□□□□ -0.3
SPG11-210ENST00000558319 FAM122CQ6P4D5 195 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 SLC39A5Q6ZMH5 540 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 ELP4Q96EB1 424 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 PCYT2Q99447 389 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 ANKRD10Q9NXR5 420 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 TMPRSS11EQ9UL52 423 aa13.15□□□□□ -0.3
SPG11-210ENST00000558319 H3BNC9 293 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 RDH16O75452 317 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 RPS27AP62979 156 aaKnown RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 UBA52P62987 128 aaKnown RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 NUMA1Q14980 2115 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 EXOSC7Q15024 291 aaKnown RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 LYPD4Q6UWN0 246 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 POPDC3Q9HBV1 291 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 HEBP1Q9NRV9 189 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 DNAJC15Q9Y5T4 150 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 NME2P22392 152 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 GDF1P27539 372 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 P2RY2P41231 377 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 MAT1AQ00266 395 aaKnown RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 EMX1Q04741 257 aaPredicted RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 SLC14A1Q13336 389 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 PLEKHS1Q5SXH7 462 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 ZNF836Q6ZNA1 936 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 TAS1R3Q7RTX0 852 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 GATA6Q92908 595 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 PITHD1Q9GZP4 211 aaPredicted RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 ENSAO43768 121 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms