RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SLC2A9Q9NRM0 540 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 LUZP4Q9P127 313 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 FAM186AA6NE01 2351 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF487B1APH4 448 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 LGI1O95970 557 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 HOXD8P13378 290 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CDK2P24941 298 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 STK19P49842 368 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SLBPQ14493 270 aaKnown RBP eCLIP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CBX2Q14781 532 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ZMAT1Q5H9K5 638 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SPNS2Q8IVW8 549 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ACTRT3Q9BYD9 372 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 GCM1Q9NP62 436 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 MMP3P08254 477 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 MRPS10P82664 201 aaKnown RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ST3GAL2Q16842 350 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SLC22A6Q4U2R8 563 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 STEAP4Q687X5 459 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 LYPD4Q6UWN0 246 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CXorf40BQ96DE9 158 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 GPR20Q99678 358 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 NDRG4Q9ULP0 352 aaKnown RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 GGT3PA6NGU5 568 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 TRIM77I1YAP6 450 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 AP4M1O00189 453 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 PEX10O60683 326 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 MGST1P10620 155 aaKnown RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 GP1BBP13224 206 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 C5AR1P21730 350 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 MS4A10Q96PG2 267 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 NPY6RQ99463 290 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 DIMT1Q9UNQ2 313 aaKnown RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CD300LBA8K4G0 201 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CYB5R3P00387 301 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 TMIGD1Q6UXZ0 262 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SLC35F3Q8IY50 421 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 WDR89Q96FK6 387 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 POM121Q96HA1 1249 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 MED20Q9H944 212 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 HEXBP07686 556 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 MSX1P28360 303 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CARD18P57730 90 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SP2Q02086 613 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 DMRTA1Q5VZB9 504 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 DHRS4L2Q6PKH6 230 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 LAS2Q8IYD9 372 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF559Q9BR84 538 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 POFUT1Q9H488 388 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 URADA6NGE7 173 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 AQP7P3A6NL99 342 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 LRP3O75074 770 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 NXPE4Q6UWF7 544 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CPEB2Q7Z5Q1 589 aaKnown RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 C7orf61Q8IZ16 206 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 FAM71CQ8NEG0 241 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 PITX2Q99697 317 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SLC12A9Q9BXP2 914 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 PCTPQ9UKL6 214 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 MYADML2A6NDP7 307 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 EMC8O43402 210 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF354AO60765 605 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 CSTBP04080 98 aaKnown RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 TYRP14679 529 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 CTHP32929 405 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 RIN1Q13671 783 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 TRILQ7L0X0 811 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 THNSL2Q86YJ6 484 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF610Q8N9Z0 462 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 TFGQ92734 400 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 SMOC2Q9H3U7 446 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF385DQ9H6B1 395 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 SLC22A11Q9NSA0 550 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 PRAMEF11O60813 436 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 UBL3O95164 117 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 DRD2P14416 443 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 PTNP21246 168 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 HERV-K104P61576 105 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 PCBP1Q15365 356 aaKnown RBP eCLIP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 GLYATL3Q5SZD4 288 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 GPR157Q5UAW9 335 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 FAM180BQ6P0A1 224 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 FAM213BQ8TBF2 198 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 TUBB1Q9H4B7 451 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 TMEM218A2RU14 115 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 C7orf77A4D0Y5 90 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 USP2O75604 605 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 C1RP00736 705 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 CHRM4P08173 479 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 TAS2R38P59533 333 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 FAM103A1Q9BTL3 118 aaKnown RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 POTEKPQ9BYX7 375 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 NTMQ9P121 344 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ABRACLQ9P1F3 81 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF724A8MTY0 619 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 PAPLNO95428 1278 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 S100A8P05109 93 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ETFAP13804 333 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 B2MP61769 119 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms