RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 C11orf24Q96F05 449 aaPredicted RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 C5orf30Q96GV9 206 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 SAMD8Q96LT4 415 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 GPR137Q96N19 417 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 ACCSQ96QU6 501 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 TRIM62Q9BVG3 475 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 HCAR1Q9BXC0 346 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 GPR61Q9BZJ8 451 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 CCSER1Q9C0I3 900 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 RIBC2Q9H4K1 309 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 RAB20Q9NX57 234 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.32□□□□□ -2.04
SPG11-206ENST00000558093 RPS6KB2Q9UBS0 482 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 ATP6V1HQ9UI12 483 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 ANGPTL2Q9UKU9 493 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 STRAPQ9Y3F4 350 aaKnown RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 SPACA6W5XKT8 324 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 NOTCH2Q04721 2471 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 C5orf51A6NDU8 294 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 SLC9B1P1A6NJY1 282 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 HSBP1L1C9JCN9 74 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 GOLGA8SH3BPF8 625 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 NDUFS8O00217 210 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 SLC17A2O00624 439 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 PDXKO00764 312 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 RASGRF2O14827 1237 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 ARPC1BO15143 372 aaKnown RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 YKT6O15498 198 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 MED7O43513 233 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 DNAJB6O75190 326 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 NIPSNAP2O75323 286 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 SERF1AO75920 110 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 SYNGR4O95473 234 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 ECDO95905 644 aaPredicted RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 MT-ATP6P00846 226 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 PCCBP05166 539 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 APRTP07741 180 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 STAG3L3P0CL85 134 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 CCDC192P0DO97 292 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 AREGP15514 252 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 GCFC2P16383 781 aaKnown RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 HNRNPA2B1P22626 353 aaKnown RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 IGFBP5P24593 272 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 EVI2BP34910 448 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 RFC2P35250 354 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 ACVR1BP36896 505 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 HTR2BP41595 481 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 ALDH3B2P48448 385 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 SLC26A2P50443 739 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 GTF2A1P52655 376 aaPredicted RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 ZNF133P52736 654 aaPredicted RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 RAG2P55895 527 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 TPM4P67936 248 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 BASP1P80723 227 aaKnown RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 CCZ1BP86790 482 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 CCZ1P86791 482 aaPredicted RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 TNFRSF17Q02223 184 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 TSTA3Q13630 321 aaPredicted RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 BTG3Q14201 252 aaPredicted RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 GNA13Q14344 377 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 WDR43Q15061 677 aaKnown RBP eCLIP2.31□□□□□ -2.04
SPG11-206ENST00000558093 SGCBQ16585 318 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 LRRC23Q53EV4 343 aaPredicted RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 LGSNQ5TDP6 509 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 PRAMEF20Q5VT98 475 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 HHATQ5VTY9 493 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 PRR5LQ6MZQ0 368 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 FAM173BQ6P4H8 233 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 ERICH5Q6P6B1 374 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 C6orf89Q6UWU4 347 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 CES3Q6UWW8 571 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 RBM43Q6ZSC3 357 aaKnown RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 MOB1BQ7L9L4 216 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 TMCO2Q7Z6W1 182 aaPredicted RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 RANBP3LQ86VV4 465 aaPredicted RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 AMZ2Q86W34 360 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 NKAIN4Q8IVV8 208 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 ZNF565Q8N9K5 539 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 COLGALT1Q8NBJ5 622 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 OR4F17Q8NGA8 305 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 OR2T34Q8NGX1 318 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 CDC26Q8NHZ8 85 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 ERMNQ8TAM6 284 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 FNDC8Q8TC99 324 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 RNASE8Q8TDE3 154 aaKnown RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 STARD8Q92502 1023 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 FRAT1Q92837 279 aaPredicted RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 FBXO32Q969P5 355 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 SGK3Q96BR1 496 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 CCDC51Q96ER9 411 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 PSKH2Q96QS6 385 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 OR4F4Q96R69 305 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 ZSCAN5AQ9BUG6 496 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 TBC1D10AQ9BXI6 508 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 GON7Q9BXV9 100 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 NLNQ9BYT8 704 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 NMUR2Q9GZQ4 415 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 RAB33BQ9H082 229 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 TMEM117Q9H0C3 514 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 OPN3Q9H1Y3 402 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms