RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 TCEA1P23193 301 aaKnown RBP23.19■■□□□ 1.3
SMAD6-202ENST00000557916 NUDT2P50583 147 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 P2RX1P51575 399 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 RBBP4Q09028 425 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 NET1Q7Z628 596 aaPredicted RBP23.19■■□□□ 1.3
SMAD6-202ENST00000557916 PTOV1Q86YD1 416 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 C11orf65Q8NCR3 313 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 OR52P1PQ8NH57 321 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 WDR60Q8WVS4 1066 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 SPRR3Q9UBC9 169 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 TNFRSF10DQ9UBN6 386 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 ICAM5Q9UMF0 924 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 RPH3AQ9Y2J0 694 aaPredicted RBP23.19■■□□□ 1.3
SMAD6-202ENST00000557916 C15orf38-AP3S2A0A0A6YYH1 394 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 OR14I1A6ND48 311 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 CLDN24A6NM45 220 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 CYP7B1O75881 506 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 GCKP35557 465 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.18■■□□□ 1.3
SMAD6-202ENST00000557916 ARSKQ6UWY0 536 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 HACD2Q6Y1H2 254 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 IFNEQ86WN2 208 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 TMCO5AQ8N6Q1 288 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 SARAFQ96BY9 339 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 HOPXQ9BPY8 73 aaPredicted RBP23.18■■□□□ 1.3
SMAD6-202ENST00000557916 GPATCH1Q9BRR8 931 aaKnown RBP23.18■■□□□ 1.3
SMAD6-202ENST00000557916 LAT2Q9GZY6 243 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 PIF1Q9H611 641 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 CACYBPQ9HB71 228 aaKnown RBP23.18■■□□□ 1.3
SMAD6-202ENST00000557916 ARL8BQ9NVJ2 186 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 TAGLN3Q9UI15 199 aa23.18■■□□□ 1.3
SMAD6-202ENST00000557916 MYO18BQ8IUG5 2567 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 UBTFL6P0CB48 400 aaPredicted RBP23.17■■□□□ 1.3
SMAD6-202ENST00000557916 NID1P14543 1247 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 PGM1P36871 562 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 CPA2P48052 419 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 GZMMP51124 257 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 SKP2Q13309 424 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 Q6ZPB1 254 aaPredicted RBP23.17■■□□□ 1.3
SMAD6-202ENST00000557916 VRK2Q86Y07 508 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 CMIPQ8IY22 773 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 ZZZ3Q8IYH5 903 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 HIPK4Q8NE63 616 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 FAM57AQ8TBR7 257 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 KLHDC3Q9BQ90 382 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 SPATA9Q9BWV2 254 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 ACAD8Q9UKU7 415 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 VDAC3Q9Y277 283 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 POLEQ07864 2286 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 ESPL1Q14674 2120 aa23.17■■□□□ 1.3
SMAD6-202ENST00000557916 A0A087WZY1 265 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 NUDT14O95848 222 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 TPOP07202 933 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 FREM3P0C091 2139 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 ETS2P15036 469 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 CCR4P51679 360 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 ZNF41P51814 821 aaPredicted RBP23.16■■□□□ 1.3
SMAD6-202ENST00000557916 SUMO3P55854 103 aaPredicted RBP23.16■■□□□ 1.3
SMAD6-202ENST00000557916 GLYR1Q49A26 553 aaPredicted RBP23.16■■□□□ 1.3
SMAD6-202ENST00000557916 LIN52Q52LA3 116 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 ARPINQ7Z6K5 226 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 CALHM3Q86XJ0 350 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 TOR1AIP2Q8NFQ8 470 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 OR5W2Q8NH69 310 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 SFXN2Q96NB2 322 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 MED17Q9NVC6 651 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 ZNF232Q9UNY5 417 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 ANGPT4Q9Y264 503 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 IFT52Q9Y366 437 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 UBR5O95071 2799 aaPredicted RBP23.16■■□□□ 1.3
SMAD6-202ENST00000557916 DNAJC13O75165 2243 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 TRGV8A0A0C4DH27 118 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 FAM47E-STBD1D6RA91 191 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 PRRG2O14669 202 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 BCKDKO14874 412 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 BCAS1O75363 584 aaPredicted RBP23.16■■□□□ 1.3
SMAD6-202ENST00000557916 STSP08842 583 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 BMP7P18075 431 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 CASP6P55212 293 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 GFRA1P56159 465 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 KRT72Q14CN4 511 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 LARS2Q15031 903 aaKnown RBP23.16■■□□□ 1.3
SMAD6-202ENST00000557916 C3AR1Q16581 482 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 NHSL2Q5HYW2 709 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 RAET1LQ5VY80 246 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 VASNQ6EMK4 673 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 KRT73Q86Y46 540 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 FAM71CQ8NEG0 241 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 ABTB1Q969K4 478 aaPredicted RBP23.16■■□□□ 1.3
SMAD6-202ENST00000557916 UGT2B28Q9BY64 529 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 SH3BGRL2Q9UJC5 107 aa23.16■■□□□ 1.3
SMAD6-202ENST00000557916 ZNF443Q9Y2A4 671 aaPredicted RBP23.16■■□□□ 1.3
SMAD6-202ENST00000557916 ACTL6AO96019 429 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 THBS1P07996 1170 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 AQP1P29972 269 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 B3GALT5-AS1P59052 145 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 CRYZQ08257 329 aaKnown RBP23.15■■□□□ 1.3
SMAD6-202ENST00000557916 CBFBQ13951 182 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 VMACQ2NL98 169 aa23.15■■□□□ 1.3
SMAD6-202ENST00000557916 GXYLT1Q4G148 440 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms