RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, human

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH11-211	ENST00000557726	FRK	P42685	505 aa	Predicted RBP	11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	ATP5J2	P56134	94 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	PDE7A	Q13946	482 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	LASP1	Q14847	261 aa	Known RBP	11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	LRIG3	Q6UXM1	1119 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	C10orf107	Q8IVU9	208 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	C4orf33	Q8N1A6	199 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	LRRN4CL	Q8ND94	238 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	ATP6V1C2	Q8NEY4	427 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	STEAP2	Q8NFT2	490 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	POC1B	Q8TC44	478 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	MTERF3	Q96E29	417 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	FCRL1	Q96LA6	429 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	GATA5	Q9BWX5	397 aa	Predicted RBP	11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	BTBD2	Q9BX70	525 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	GIN1	Q9NXP7	522 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	TMED5	Q9Y3A6	229 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	SNX8	Q9Y5X2	465 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	VPS13C	Q709C8	3753 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	GJE1	A6NN92	205 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	TMEM114	B3SHH9	223 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	INAFM1	C9JVW0	142 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726		H3BNH8	94 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	GTPBP1	O00178	669 aa	Known RBP	11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	LSM1	O15116	133 aa	Known RBP	11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	CLOCK	O15516	846 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	TRIM13	O60858	407 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	HMGN2	P05204	90 aa	Known RBP	11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	BCKDHA	P12694	445 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	PSMB1	P20618	241 aa	Known RBP	11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	IL32	P24001	234 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	SHC1	P29353	583 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	RNF144A	P50876	292 aa	Predicted RBP	11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	ZNF117	Q03924	483 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	FOXF1	Q12946	379 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	CD226	Q15762	336 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	ZNF239	Q16600	458 aa	Known RBP	11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	SPDYE7P	Q495Y7	208 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	HOMEZ	Q8IX15	550 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	ZNF611	Q8N823	705 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	ZNF614	Q8N883	585 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	ZNF527	Q8NB42	609 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	EPS8L3	Q8TE67	593 aa	Known RBP	11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	ABHD3	Q8WU67	409 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	CDS1	Q92903	461 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	S100PBP	Q96BU1	408 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	FAM120B	Q96EK7	910 aa	Known RBP	11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	KLHDC3	Q9BQ90	382 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	TRMO	Q9BU70	441 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	HDHD5	Q9BXW7	423 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	OR10A4	Q9H209	315 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	TUBB1	Q9H4B7	451 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	PPCS	Q9HAB8	311 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	DUSP22	Q9NRW4	184 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	FAF1	Q9UNN5	650 aa	Predicted RBP	11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	LAMP3	Q9UQV4	416 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	DNAJC15	Q9Y5T4	150 aa		11.4	□□□□□ -0.58
RDH11-211	ENST00000557726	RTTN	Q86VV8	2226 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	NPIPA5	A0A0B4J1W7	369 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	NPIPA7	E9PJI5	369 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	ZNF195	O14628	629 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	TMCC2	O75069	709 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	LINGO3	P0C6S8	592 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	NPIPA8	P0DM63	369 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	PAX1	P15863	534 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	ELK4	P28324	431 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	MAPK1	P28482	360 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	RPL3	P39023	403 aa	Known RBP	11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	CCT3	P49368	545 aa	Known RBP	11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	P2RX1	P51575	399 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	RPS4X	P62701	263 aa	Known RBP	11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	TP53BP2	Q13625	1128 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	CAPRIN1	Q14444	709 aa	Known RBP	11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	PCLAF	Q15004	111 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	RNPS1	Q15287	305 aa	Known RBP	11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	TSC22D1	Q15714	1073 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	KANK2	Q63ZY3	851 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	RNF165	Q6ZSG1	346 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	FCRLA	Q7L513	359 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	MTERF4	Q7Z6M4	381 aa	Known RBP	11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	PRIMA1	Q86XR5	153 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	TDRP	Q86YL5	185 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	TUSC5	Q8IXB3	177 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	OR7A2P	Q8NGA2	310 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	FBXO27	Q8NI29	283 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	RAB3IL1	Q8TBN0	382 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	ADAMTS15	Q8TE58	950 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	RNF128	Q8TEB7	428 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	TWIST2	Q8WVJ9	160 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	CPNE4	Q96A23	557 aa	Predicted RBP	11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	STAC	Q99469	402 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	SRXN1	Q9BYN0	137 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	HOXD1	Q9GZZ0	328 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	PIGU	Q9H490	435 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	NGB	Q9NPG2	151 aa		11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.39	□□□□□ -0.59
RDH11-211	ENST00000557726	ZNF701	Q9NV72	531 aa	Predicted RBP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms