RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 FIGNL2A6NMB9 653 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 AHRRA9YTQ3 701 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 ETV2O00321 342 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-234ENST00000557703 FAAHO00519 579 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 HCRTR2O43614 444 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 ZIC3O60481 467 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 CDC40O60508 579 aaKnown RBP eCLIP12.44□□□□□ -0.42
SHMT2-234ENST00000557703 WDR1O75083 606 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 PGM3O95394 542 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 BCHEP06276 602 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 CHRM4P08173 479 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 UQCRBP14927 111 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 ZNF41P51814 821 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-234ENST00000557703 CASP9P55211 416 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 PER3P56645 1201 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 KCNC4Q03721 635 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 SF3A3Q12874 501 aaKnown RBP eCLIP12.44□□□□□ -0.421e-13■■■□□ 16.4
SHMT2-234ENST00000557703 CBFBQ13951 182 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 VEZF1Q14119 521 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 SPATS1Q496A3 300 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 RNF220Q5VTB9 566 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 VASNQ6EMK4 673 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 IFNEQ86WN2 208 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 ANKFN1Q8N957 763 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 OR5W2Q8NH69 310 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 OR14L1PQ8NHC6 308 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 RASSF5Q8WWW0 418 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 TMEM234Q8WY98 164 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 TMEM19Q96HH6 336 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 TP63Q9H3D4 680 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-234ENST00000557703 FLRT3Q9NZU0 649 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 ICAM5Q9UMF0 924 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 ANGPT4Q9Y264 503 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 GPC6Q9Y625 555 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-234ENST00000557703 A0A1B0GTH9 108 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 FXYD1O00168 92 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 ZIC2O95409 532 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-234ENST00000557703 IFNA14P01570 189 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 PEPDP12955 493 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 CPN1P15169 458 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 PGCP20142 388 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 ELK4P28324 431 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 PGM1P36871 562 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 CA7P43166 264 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 GFRA1P56159 465 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 DLX5P56178 289 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 EEFSECP57772 596 aaKnown RBP12.43□□□□□ -0.42
SHMT2-234ENST00000557703 SCARB2Q14108 478 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 TOMM20Q15388 145 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 ADRM1Q16186 407 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 CYP51A1Q16850 503 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 C4orf17Q53FE4 359 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 EIPR1Q53HC9 387 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 TMEM211Q6ICI0 200 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 GALNT10Q86SR1 603 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 PATL1Q86TB9 770 aaKnown RBP12.43□□□□□ -0.42
SHMT2-234ENST00000557703 CHERPQ8IWX8 916 aaKnown RBP12.43□□□□□ -0.42
SHMT2-234ENST00000557703 GTPBP8Q8N3Z3 284 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-234ENST00000557703 TNIP2Q8NFZ5 429 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 BCAS4Q8TDM0 211 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 WDR60Q8WVS4 1066 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 ST8SIA1Q92185 356 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 ABTB1Q969K4 478 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-234ENST00000557703 RCN3Q96D15 328 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 REXO5Q96IC2 774 aaKnown RBP12.43□□□□□ -0.42
SHMT2-234ENST00000557703 GPATCH1Q9BRR8 931 aaKnown RBP12.43□□□□□ -0.42
SHMT2-234ENST00000557703 MED11Q9P086 117 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 TAGLN3Q9UI15 199 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 FBXL2Q9UKC9 423 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 ACAD8Q9UKU7 415 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 L3MBTL1Q9Y468 752 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 AP4B1Q9Y6B7 739 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 FLNCQ14315 2725 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 LRRK2Q5S007 2527 aa12.43□□□□□ -0.42
SHMT2-234ENST00000557703 DIDO1Q9BTC0 2240 aaKnown RBP12.42□□□□□ -0.42
SHMT2-234ENST00000557703 C2orf72A6NCS6 295 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 E9PLN8 166 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 C8BP07358 591 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 CD1EP15812 388 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 HK1P19367 917 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 GNLYP22749 145 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 PRKAR1BP31321 381 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 HTR3AP46098 478 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 MTPNP58546 118 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 ZNF117Q03924 483 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 SKP2Q13309 424 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 MAPK11Q15759 364 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 CD226Q15762 336 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 TMEM44Q2T9K0 475 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 SLC25A53Q5H9E4 307 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 OR5M10Q6IEU7 315 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 ZNF550Q7Z398 422 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 CALHM3Q86XJ0 350 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 TREML1Q86YW5 311 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 ZNF614Q8N883 585 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 OR52P1PQ8NH57 321 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 OR10A6Q8NH74 314 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 PHF10Q8WUB8 498 aaKnown RBP12.42□□□□□ -0.42
SHMT2-234ENST00000557703 MRGPRX4Q96LA9 322 aa12.42□□□□□ -0.42
SHMT2-234ENST00000557703 VKORC1Q9BQB6 163 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms