RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 RPS7P62081 194 aaKnown RBP11□□□□□ -0.65
VIPAS39-211ENST00000557658 DGCR2P98153 550 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 E2F1Q01094 437 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 ZIC1Q15915 447 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 ST3GAL2Q16842 350 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 RNASE12Q5GAN4 147 aaKnown RBP11□□□□□ -0.65
VIPAS39-211ENST00000557658 C18orf63Q68DL7 685 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 PXKQ7Z7A4 578 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 FAM20CQ8IXL6 584 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC44A3Q8N4M1 653 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 TMIEQ8NEW7 156 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 OR9A2Q8NGT5 310 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 RPLP0P6Q8NHW5 317 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 GIMAP1Q8WWP7 306 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 MS4A6EQ96DS6 147 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 COX14Q96I36 57 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 ZFP3Q96NJ6 502 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 CD180Q99467 661 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 PRDM7Q9NQW5 492 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 DLL4Q9NR61 685 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 TM7SF3Q9NS93 570 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 CES1P1Q9UKY3 287 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 PRELID1Q9Y255 219 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 MRPS7Q9Y2R9 242 aaKnown RBP11□□□□□ -0.65
VIPAS39-211ENST00000557658 MDC1Q14676 2089 aaKnown RBP11□□□□□ -0.65
VIPAS39-211ENST00000557658 IGKV1-8A0A0C4DH67 115 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 A0A1W2PS29 197 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 FAM86C2PA6NEL3 165 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 DUXAA6NLW8 204 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 REM1O75628 298 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 ZIC2O95409 532 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 ADH1AP07327 375 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 SYPP08247 313 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF250P15622 560 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 PTNP21246 168 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 ENPP1P22413 925 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 BCL6P41182 706 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 CCR6P51684 374 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 CLCNKAP51800 687 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 AANATQ16613 207 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 PUS10Q3MIT2 529 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 TMEM52BQ4KMG9 183 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 ACSM3Q53FZ2 586 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC22A10Q63ZE4 541 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 ABHD17CQ6PCB6 329 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 BAIAP2L2Q6UXY1 529 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 ERN2Q76MJ5 926 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 CDH24Q86UP0 819 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 TEX19Q8NA77 164 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 OR56B4Q8NH76 319 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 KISS1RQ969F8 398 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 C12orf66Q96MD2 445 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 FERD3LQ96RJ6 166 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 MACROD1Q9BQ69 325 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 DPH1Q9BZG8 443 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 C12orf10Q9HB07 376 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 ABRACLQ9P1F3 81 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 CLEC4AQ9UMR7 237 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 CIB4A0PJX0 185 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 C4orf51C9J302 202 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 PRR23D1E9PI22 279 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 J3QLW9 94 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 BHLHE40O14503 412 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 MOSPD3O75425 235 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 FGF19O95750 216 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 CISD3P0C7P0 127 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 PRR23D2P0DMB1 279 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF19P17023 458 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 SSTR2P30874 369 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 CAPZA2P47755 286 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC16A1P53985 500 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 TAGLNQ01995 201 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 ADAMTSL4Q6UY14 1074 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 RTL4Q6ZR62 310 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC51BQ86UW2 128 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 CMIPQ8IY22 773 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF687Q8N1G0 1237 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 LNX2Q8N448 690 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 MS4A15Q8N5U1 240 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 CD99L2Q8TCZ2 262 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 KAT2AQ92830 837 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC35A4Q96G79 324 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 MSANTD3Q96H12 275 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 HS6ST2Q96MM7 605 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 HCAR1Q9BXC0 346 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 SPRTNQ9H040 489 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 MTHFD2LQ9H903 347 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 SIDT1Q9NXL6 827 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF224Q9NZL3 707 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 EMC3Q9P0I2 261 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF780BQ9Y6R6 833 aa10.99□□□□□ -0.65
VIPAS39-211ENST00000557658 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 STX11O75558 287 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 SC5DO75845 299 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 MPC2O95563 127 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 MT-ND4P03905 459 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 SAGP10523 405 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 ACVR1BP36896 505 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 NRG3P56975 720 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms