RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 GRAMD2AQ8IUY3 354 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 CHDHQ8NE62 594 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-207ENST00000556831 TOR1AIP2Q8NFQ8 470 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 OR9I1Q8NGQ6 314 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 LILRB4Q8NHJ6 448 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 RFWD2Q8NHY2 731 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 PNPT1Q8TCS8 783 aaKnown RBP12.76□□□□□ -0.37
SLIRP-207ENST00000556831 ZPLD1Q8TCW7 415 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 RAB8BQ92930 207 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 THOC1Q96FV9 657 aaKnown RBP12.76□□□□□ -0.37
SLIRP-207ENST00000556831 SDF2Q99470 211 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 TM9SF2Q99805 663 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 INPP5KQ9BT40 448 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 RTN4RQ9BZR6 473 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 NMUR2Q9GZQ4 415 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 RAD21L1Q9H4I0 556 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 CALHM2Q9HA72 323 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 CCDC167Q9P0B6 97 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 DCTN4Q9UJW0 460 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 LIPT1Q9Y234 373 aa12.76□□□□□ -0.37
SLIRP-207ENST00000556831 A0A0G2JND7 137 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 A0A0G2JNJ9 132 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 OR2M5A3KFT3 312 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 CD8B2A6NJW9 211 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 ZIC3O60481 467 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 EDF1O60869 148 aaKnown RBP12.75□□□□□ -0.37
SLIRP-207ENST00000556831 CYP7B1O75881 506 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 NR2F1P10589 423 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 ZNF708P17019 499 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 TIMP3P35625 211 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 NUP214P35658 2090 aaPredicted RBP12.75□□□□□ -0.37
SLIRP-207ENST00000556831 EIF1P41567 113 aaKnown RBP12.75□□□□□ -0.37
SLIRP-207ENST00000556831 CDKN2CP42773 168 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 CRATP43155 626 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 MAGEA8P43361 318 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 STARP49675 285 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 LHX2P50458 406 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 ATP4BP51164 291 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 P2RX1P51575 399 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 SUMO3P55854 103 aaPredicted RBP12.75□□□□□ -0.37
SLIRP-207ENST00000556831 GNA13Q14344 377 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 BCL2A1Q16548 175 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 SLC25A35Q3KQZ1 300 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 KLHL26Q53HC5 615 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 PDZK1Q5T2W1 519 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 PPP4R4Q6NUP7 873 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 OR5M1Q8NGP8 315 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 OIT3Q8WWZ8 545 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 MARVELD3Q96A59 401 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 VPS33AQ96AX1 596 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 ROPN1LQ96C74 230 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 TUBA1CQ9BQE3 449 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 ZNF350Q9GZX5 532 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 SERHL2Q9H4I8 314 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 P2RX2Q9UBL9 471 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 Q9UFV3 132 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 MKLN1Q9UL63 735 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 CARD8Q9Y2G2 431 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 AP4B1Q9Y6B7 739 aa12.75□□□□□ -0.37
SLIRP-207ENST00000556831 CACNA1CQ13936 2221 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 NKX2-6A6NCS4 301 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 SERINC4A6NH21 518 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 CLCA1A8K7I4 914 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 EBAG9O00559 213 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 ZNF264O43296 627 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 KIAA0513O60268 411 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 EIF4E2O60573 245 aaKnown RBP12.74□□□□□ -0.37
SLIRP-207ENST00000556831 TNFRSF21O75509 655 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 CSTAP01040 98 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 VIMP08670 466 aaKnown RBP12.74□□□□□ -0.37
SLIRP-207ENST00000556831 BMP5P22003 454 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 MRPL19P49406 292 aaKnown RBP12.74□□□□□ -0.37
SLIRP-207ENST00000556831 RNF144AP50876 292 aaPredicted RBP12.74□□□□□ -0.37
SLIRP-207ENST00000556831 ZNF117Q03924 483 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 CBFBQ13951 182 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 CD226Q15762 336 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 SGCBQ16585 318 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 PDSS1Q5T2R2 415 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 HEPHL1Q6MZM0 1159 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 ARSKQ6UWY0 536 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 EIF3MQ7L2H7 374 aaKnown RBP12.74□□□□□ -0.37
SLIRP-207ENST00000556831 ZNF619Q8N2I2 560 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 STON2Q8WXE9 905 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 SPDL1Q96EA4 605 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 ZFP3Q96NJ6 502 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 MRGBPQ9NV56 204 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 MED17Q9NVC6 651 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 TMEM45AQ9NWC5 275 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 THUMPD1Q9NXG2 353 aaKnown RBP12.74□□□□□ -0.37
SLIRP-207ENST00000556831 CALML5Q9NZT1 146 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 SLC35A3Q9Y2D2 325 aa12.74□□□□□ -0.37
SLIRP-207ENST00000556831 ARHGAP21Q5T5U3 1957 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 MBD3L4A6NDZ8 208 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-207ENST00000556831 MBD3L3A6NE82 208 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-207ENST00000556831 MBD3L5A6NJ08 208 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-207ENST00000556831 SLC22A20A6NK97 555 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 GJE1A6NN92 205 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 HMGN4O00479 90 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 H6PDO95479 791 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 ZCCHC18P0CG32 403 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms