RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, human

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-223	ENST00000556689	OR10H5	Q8NGA6	315 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	POC1B	Q8TC44	478 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	RNF128	Q8TEB7	428 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	AEN	Q8WTP8	325 aa	Known RBP	11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	CPNE4	Q96A23	557 aa	Predicted RBP	11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	ADAD1	Q96M93	576 aa	Known RBP	11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	TNFRSF13C	Q96RJ3	184 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	POTEKP	Q9BYX7	375 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	GP6	Q9HCN6	339 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	EQTN	Q9NQ60	294 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	TMEM160	Q9NX00	188 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	NINJ2	Q9NZG7	142 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	KLHL13	Q9P2N7	655 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	B3GALT5	Q9Y2C3	310 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	STK38L	Q9Y2H1	464 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	TIMM22	Q9Y584	194 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	ZNF814	B7Z6K7	855 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	NKX2-2	O95096	273 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	ENO1	P06733	434 aa	Known RBP	11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	MAP3K8	P41279	467 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	EIF1	P41567	113 aa	Known RBP	11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	NUDT6	P53370	316 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	PRKAG1	P54619	331 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	MANF	P55145	182 aa	Known RBP	11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	PKNOX1	P55347	436 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	C21orf58	P58505	322 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	ZNF239	Q16600	458 aa	Known RBP	11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	KRTAP24-1	Q3LI83	254 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	UBAP2	Q5T6F2	1119 aa	Known RBP	11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	CLEC2A	Q6UVW9	174 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	CROCCP2	Q86T23	111 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	MISP	Q8IVT2	679 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	SLC43A2	Q8N370	569 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	GOLGA6L1	Q8N7Z2	621 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	CDRT4	Q8N9R6	151 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	CEP70	Q8NHQ1	597 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	B4GALNT2	Q8NHY0	566 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	FAM110B	Q8TC76	370 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	HOXB13	Q92826	284 aa	Predicted RBP	11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	MUCL1	Q96DR8	90 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	PKNOX2	Q96KN3	472 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	TMEM237	Q96Q45	408 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	PAFAH2	Q99487	392 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	FUT8	Q9BYC5	575 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	AMBRA1	Q9C0C7	1298 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	IQCG	Q9H095	443 aa	Known RBP	11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	PPCS	Q9HAB8	311 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	MYNN	Q9NPC7	610 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	UBQLN4	Q9NRR5	601 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	LPAR3	Q9UBY5	353 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689	PRR14L	Q5THK1	2151 aa		11.23	□□□□□ -0.61
SHMT2-223	ENST00000556689		A0A096LNT2	108 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	SHISA9	B4DS77	424 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	TRIM49D1	C9J1S8	452 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	POC1B-GALNT4	F8VUJ3	575 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	HAX1	O00165	279 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	SCD	O00767	359 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	KCNK2	O95069	426 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	ABHD2	P08910	425 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	LINGO3	P0C6S8	592 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	CR1	P17927	2039 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	PTN	P21246	168 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	SHC1	P29353	583 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	LCN1	P31025	176 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	GPC1	P35052	558 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	THBS2	P35442	1172 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	VLDLR	P98155	873 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	LOXL1	Q08397	574 aa	Predicted RBP	11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	LCP2	Q13094	533 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	PPA1	Q15181	289 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	STK11	Q15831	433 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	IMPG1	Q17R60	797 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	CYB5R2	Q6BCY4	276 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	SEZ6L2	Q6UXD5	910 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689		Q6ZT83	130 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	FCRLA	Q7L513	359 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	SSX8	Q7RTT4	187 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	ZNF551	Q7Z340	670 aa	Predicted RBP	11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	TDRP	Q86YL5	185 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	MREG	Q8N565	214 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	OR6Y1	Q8NGX8	325 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	FAM76A	Q8TAV0	307 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	RADIL	Q96JH8	1075 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	KLHDC3	Q9BQ90	382 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	SRXN1	Q9BYN0	137 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	ZNF180	Q9UJW8	692 aa		11.22	□□□□□ -0.61
SHMT2-223	ENST00000556689	EXOC1L	A0A1B0GW35	172 aa		11.21	□□□□□ -0.61
SHMT2-223	ENST00000556689		A0A1W2PQD3	144 aa		11.21	□□□□□ -0.61
SHMT2-223	ENST00000556689	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.21	□□□□□ -0.61
SHMT2-223	ENST00000556689	GJE1	A6NN92	205 aa		11.21	□□□□□ -0.61
SHMT2-223	ENST00000556689	ZNF195	O14628	629 aa		11.21	□□□□□ -0.61
SHMT2-223	ENST00000556689	EFNA2	O43921	213 aa		11.21	□□□□□ -0.61
SHMT2-223	ENST00000556689	LYZL6	O75951	148 aa		11.21	□□□□□ -0.61
SHMT2-223	ENST00000556689	SNRPA	P09012	282 aa	Known RBP	11.21	□□□□□ -0.61
SHMT2-223	ENST00000556689	FAM153B	P0C7A2	387 aa		11.21	□□□□□ -0.61
SHMT2-223	ENST00000556689	ATP5F1	P24539	256 aa	Predicted RBP	11.21	□□□□□ -0.61

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