RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 MRPS18AQ9NVS2 196 aaKnown RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 SIDT1Q9NXL6 827 aaKnown RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 LRIT1Q9P2V4 623 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 CBLCQ9ULV8 474 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 STUB1Q9UNE7 303 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 PLCL2Q9UPR0 1127 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 SPIN1Q9Y657 262 aaPredicted RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 TRAV27A0A087WT01 109 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 A0A0B4J2E0 115 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 A0A1B0GWA3 101 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 A0A1B0GX12 115 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 SMIM30A4D0T7 59 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 PLD2O14939 933 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 SRPX2O60687 465 aaPredicted RBP9.35□□□□□ -0.91
TMEM260-211ENST00000556648 LALBAP00709 142 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 CLEC2LP0C7M8 214 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 MYL12AP19105 171 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 DRD5P21918 477 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 RPS19P39019 145 aaKnown RBP9.35□□□□□ -0.91
TMEM260-211ENST00000556648 GPR3P46089 330 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 SEPHS1P49903 392 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 OR1D5P58170 312 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 BNC1Q01954 994 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 PRKCDQ05655 676 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 DNASE1L3Q13609 305 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 ZNF791Q3KP31 576 aaPredicted RBP9.35□□□□□ -0.91
TMEM260-211ENST00000556648 AMZ1Q400G9 498 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 C14orf28Q4W4Y0 310 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 KLHL22Q53GT1 634 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 COL13A1Q5TAT6 717 aaPredicted RBP9.35□□□□□ -0.91
TMEM260-211ENST00000556648 PTCRAQ6ISU1 281 aaPredicted RBP9.35□□□□□ -0.91
TMEM260-211ENST00000556648 SMARCD3Q6STE5 483 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 CPOQ8IVL8 374 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 ZNF595Q8IYB9 648 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 CLDN22Q8N7P3 220 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 OR2T33Q8NG76 320 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 OR6C4Q8NGE1 309 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 C16orf52Q8NHV5 167 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 C1orf216Q8TAB5 229 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 FAM174AQ8TBP5 190 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 BRIX1Q8TDN6 353 aaKnown RBP9.35□□□□□ -0.91
TMEM260-211ENST00000556648 POLE3Q9NRF9 147 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 TOR4AQ9NXH8 423 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 NLGN3Q9NZ94 848 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 SEC14L4Q9UDX3 406 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 FBXL21Q9UKT6 434 aa9.35□□□□□ -0.91
TMEM260-211ENST00000556648 CAB39Q9Y376 341 aaPredicted RBP9.35□□□□□ -0.91
TMEM260-211ENST00000556648 CACNA1IQ9P0X4 2223 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 USP34Q70CQ2 3546 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 TLCD2A6NGC4 264 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 LMO7DNF2Z398 122 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 BHLHE40O14503 412 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 CTDSP2O14595 271 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 FMO6PO60774 539 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 CPEP16870 476 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 GTF2E2P29084 291 aaKnown RBP9.34□□□□□ -0.91
TMEM260-211ENST00000556648 SLC1A3P43003 542 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 EFNA3P52797 238 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 WNT4P56705 351 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 CFHR1Q03591 330 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 C1DQ13901 141 aaKnown RBP9.34□□□□□ -0.91
TMEM260-211ENST00000556648 OXA1LQ15070 435 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 TRIM16LQ309B1 348 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 TIMM50Q3ZCQ8 353 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 GARNL3Q5VVW2 1013 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 C22orf42Q6IC83 251 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 PLBD1Q6P4A8 553 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 SIRT6Q8N6T7 355 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 SYT14Q8NB59 555 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 ZSCAN1Q8NBB4 408 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 ZNF485Q8NCK3 441 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 TOR1AIP2Q8NFQ8 470 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 OR9Q1Q8NGQ5 310 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 OR51Q1Q8NH59 317 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 BPIFA2Q96DR5 249 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 RBM18Q96H35 190 aaKnown RBP9.34□□□□□ -0.91
TMEM260-211ENST00000556648 HS6ST2Q96MM7 605 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 DCLRE1CQ96SD1 692 aaKnown RBP9.34□□□□□ -0.91
TMEM260-211ENST00000556648 ZNF649Q9BS31 505 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 MROQ9BYG7 248 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 ABCB10Q9NRK6 738 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 SNTG1Q9NSN8 517 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 TBCCD1Q9NVR7 557 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 FUOMA2VDF0 154 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 RHPN2P1A8MT19 583 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 A8MUA0 341 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 NPIPB9F8W1W9 429 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 BOLA2-SMG1P6H3BVE0 249 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 TBX1O43435 398 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 PIAS2O75928 621 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 IFNA16P05015 189 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 CT45A8P0DMV1 189 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 CT45A9P0DMV2 189 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 CD1CP29017 333 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 CSF2RBP32927 897 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 OR1D4P47884 311 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 PPP5CP53041 499 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 STARD6P59095 220 aa9.34□□□□□ -0.91
TMEM260-211ENST00000556648 ZNHIT3Q15649 155 aaPredicted RBP9.34□□□□□ -0.91
TMEM260-211ENST00000556648 CT45A2Q5DJT8 189 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms