RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ACVR1BP36896 505 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 ALDH9A1P49189 494 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 CLDN15P56746 228 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 EEFSECP57772 596 aaKnown RBP8.98□□□□□ -0.97
SCFD1-220ENST00000556486 FGFBP1Q14512 234 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 ERCC6LQ2NKX8 1250 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 ZNF678Q5SXM1 525 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 FAM180BQ6P0A1 224 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 SYT10Q6XYQ8 523 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 GPRIN3Q6ZVF9 776 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 LARP4Q71RC2 724 aaKnown RBP eCLIP8.98□□□□□ -0.97
SCFD1-220ENST00000556486 RPS27LQ71UM5 84 aaKnown RBP8.98□□□□□ -0.97
SCFD1-220ENST00000556486 CTAGE4Q8IX94 777 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 MIER2Q8N344 545 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 CDYL2Q8N8U2 506 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 OR9A2Q8NGT5 310 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 ANP32BQ92688 251 aaKnown RBP8.98□□□□□ -0.97
SCFD1-220ENST00000556486 CAVIN3Q969G5 261 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 ZBED6CLQ96FA7 236 aaPredicted RBP8.98□□□□□ -0.97
SCFD1-220ENST00000556486 PGM2Q96G03 612 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 MEGF10Q96KG7 1140 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 HBEGFQ99075 208 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 FMO2Q99518 471 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 C19orf24Q9BVV8 132 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 KLHL4Q9C0H6 718 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 RNF122Q9H9V4 155 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 FOLH1BQ9HBA9 442 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 ELOVL5Q9NYP7 299 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 TAS2R9Q9NYW1 312 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 STK38LQ9Y2H1 464 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 WBP11Q9Y2W2 641 aaKnown RBP8.98□□□□□ -0.97
SCFD1-220ENST00000556486 ZNF175Q9Y473 711 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 IGLV3-32A0A0A0MS00 114 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-220ENST00000556486 SLC22A20A6NK97 555 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 MYO1GB0I1T2 1018 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 CD5LO43866 347 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 COQ9O75208 318 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 CGAP01215 116 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 ENO1P06733 434 aaKnown RBP8.97□□□□□ -0.97
SCFD1-220ENST00000556486 ABHD2P08910 425 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 SNRPAP09012 282 aaKnown RBP8.97□□□□□ -0.97
SCFD1-220ENST00000556486 CHN1P15882 459 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 TSPAN8P19075 237 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 DDCP20711 480 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 IMPDH1P20839 514 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 IL12BP29460 328 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 EVI2BP34910 448 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 ADMP35318 185 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 CDKN1AP38936 164 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 KIR2DL2P43627 348 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-220ENST00000556486 PKNOX1P55347 436 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 ACSM2AQ08AH3 577 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 LCP2Q13094 533 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 EXOC3L2Q2M3D2 409 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 TMEM44Q2T9K0 475 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 GLYR1Q49A26 553 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-220ENST00000556486 UNC50Q53HI1 259 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 TCHHL1Q5QJ38 904 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-220ENST00000556486 ACSM2BQ68CK6 577 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 ZNF704Q6ZNC4 412 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-220ENST00000556486 P4HA3Q7Z4N8 544 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 ZAR1Q86SH2 424 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 UBQLNLQ8IYU4 475 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 FAM9CQ8IZT9 166 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 Q8N1Y9 231 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 OR2L13Q8N349 312 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 OR2M3Q8NG83 312 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 OR7G2Q8NG99 324 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 C16orf78Q8WTQ4 265 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 IGFBPL1Q8WX77 278 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 HOXB13Q92826 284 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-220ENST00000556486 KAT2AQ92830 837 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 MTBPQ96DY7 904 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 L3HYPDHQ96EM0 354 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 TMEM237Q96Q45 408 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 CXorf56Q9H5V9 222 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 ANKRA2Q9H9E1 313 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 GIMAP4Q9NUV9 329 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 ZNF701Q9NV72 531 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-220ENST00000556486 FAM120CQ9NX05 1096 aaKnown RBP8.97□□□□□ -0.97
SCFD1-220ENST00000556486 DKKL1Q9UK85 242 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 GRID1Q9ULK0 1009 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 C19orf53Q9UNZ5 99 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-220ENST00000556486 GPR45Q9Y5Y3 372 aa8.97□□□□□ -0.97
SCFD1-220ENST00000556486 A0A087WUV0 522 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-220ENST00000556486 GNG14A0A1W2PPG7 69 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 CCDC151A5D8V7 595 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 TTC36A6NLP5 189 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 C17orf51A8MQB3 221 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 A8MV72 311 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-220ENST00000556486 NDUFS7O75251 213 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 SUPT7LO94864 414 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 ESRRBO95718 433 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 PAX1P15863 534 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 TAC1P20366 129 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 ATP5F1P24539 256 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-220ENST00000556486 FPR2P25090 351 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 PRKAA2P54646 552 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 ZNF763Q0D2J5 394 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms