RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 KRT6BP04259 564 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 RBP1P09455 135 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 CHN1P15882 459 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 PSMA4P25789 261 aaKnown RBP12.3□□□□□ -0.44
ACTN1-219ENST00000556432 OR3A2P47893 321 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 KRT6CP48668 564 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 SERPINB8P50452 374 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 PDLIM4P50479 330 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 CDH13P55290 713 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 CHRNB3Q05901 458 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 FOXF1Q12946 379 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 CR1LQ2VPA4 569 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 SPIN4Q56A73 249 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 ZNF100Q8IYN0 542 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-219ENST00000556432 OR52N5Q8NH56 324 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 ACTRT2Q8TDY3 377 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 ZNF775Q96BV0 537 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-219ENST00000556432 LMF2Q9BU23 707 aaKnown RBP12.3□□□□□ -0.44
ACTN1-219ENST00000556432 SHCBP1LQ9BZQ2 653 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 ADAM19Q9H013 955 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 GP6Q9HCN6 339 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 MIEF1Q9NQG6 463 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 KLHL9Q9P2J3 617 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 PMF1-BGLAPU3KQ54 211 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 TENM1Q9UKZ4 2725 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 OR5H1A6NKK0 313 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 MYO1GB0I1T2 1018 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 M0R1B8 84 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 OXSR1O95747 527 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-219ENST00000556432 HSD3B1P14060 373 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 PTAFRP25105 342 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 HSD3B2P26439 372 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 TIA1P31483 386 aaKnown RBP eCLIP12.29□□□□□ -0.44
ACTN1-219ENST00000556432 EIF1P41567 113 aaKnown RBP12.29□□□□□ -0.44
ACTN1-219ENST00000556432 MANFP55145 182 aaKnown RBP12.29□□□□□ -0.44
ACTN1-219ENST00000556432 RAE1P78406 368 aaKnown RBP12.29□□□□□ -0.44
ACTN1-219ENST00000556432 BTKQ06187 659 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 SLC29A2Q14542 456 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 TMEM176BQ3YBM2 270 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-219ENST00000556432 GLE1Q53GS7 698 aaKnown RBP12.29□□□□□ -0.44
ACTN1-219ENST00000556432 B3GLCTQ6Y288 498 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 SZRD1Q7Z422 152 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 P2RY8Q86VZ1 359 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 PLD6Q8N2A8 252 aaKnown RBP12.29□□□□□ -0.44
ACTN1-219ENST00000556432 OR2L13Q8N349 312 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 SLC43A2Q8N370 569 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 OR4C3Q8NH37 302 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 B4GALNT2Q8NHY0 566 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 POC1BQ8TC44 478 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 TRMOQ9BU70 441 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 PRR14Q9BWN1 585 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 FKBP7Q9Y680 259 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 ATP23Q9Y6H3 246 aa12.29□□□□□ -0.44
ACTN1-219ENST00000556432 A0A1W2PR80 420 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 CIB4A0PJX0 185 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 CCT8L1PA6NM43 557 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 CCDC188H7C350 402 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 RAD51DO75771 328 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 PSMG1O95456 288 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 RPS17P08708 135 aaKnown RBP12.28□□□□□ -0.44
ACTN1-219ENST00000556432 ANXA4P09525 319 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-219ENST00000556432 DDCP20711 480 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 ENPP1P22413 925 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 IGHV1-2P23083 117 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 CD40P25942 277 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 ELK4P28324 431 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 HMOX2P30519 316 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 SLC7A1P30825 629 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 NR4A2P43354 598 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 PRIM2P49643 509 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 C2orf80Q0P641 193 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 VPS26BQ4G0F5 336 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 ZNF544Q6NX49 715 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 UBE2J2Q8N2K1 259 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 FBXO30Q8TB52 745 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 FAM110BQ8TC76 370 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 ZNF483Q8TF39 744 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-219ENST00000556432 ZFP90Q8TF47 636 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 APIPQ96GX9 242 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 KLHDC3Q9BQ90 382 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 ACPTQ9BZG2 426 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 GLIPR2Q9H4G4 154 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 CXorf36Q9H7Y0 433 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 MYNNQ9NPC7 610 aa12.28□□□□□ -0.44
ACTN1-219ENST00000556432 IGHV4-61A0A0C4DH41 118 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 GOLGA8QA0A0J9YX86 632 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 HMX2A2RU54 273 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 GOLGA8OA6NCC3 632 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 TTC36A6NLP5 189 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 GOLGA8NF8WBI6 632 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 GOLGA8RI6L899 631 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 SCDO00767 359 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF195O14628 629 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 ULK1O75385 1050 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 NGFRP08138 427 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 MAGEA4P43358 317 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 ACTG1P63261 375 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 RASGEF1BQ0VAM2 473 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 HSPB3Q12988 150 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms