RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 OR10Q1Q8NGQ4 319 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 BPIFA2Q96DR5 249 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 TSSK2Q96PF2 358 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 SORCS2Q96PQ0 1159 aa10.08□□□□□ -0.8
ACTN1-216ENST00000556083 TMEM184BQ9Y519 407 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-216ENST00000556083 NME4O00746 187 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 RFPL2O75678 378 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 RAB3DO95716 219 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 MMP12P39900 470 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 GPR4P46093 362 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 TAS2R19P59542 299 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 PITX1P78337 314 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 GPLD1P80108 840 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 TAZQ16635 292 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 CCNJQ5T5M9 372 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 DCAF12Q5T6F0 453 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 USP53Q70EK8 1073 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 LILRB2Q8N423 598 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 C12orf76Q8N812 135 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 OR5W2Q8NH69 310 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 APIPQ96GX9 242 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 FAM46AQ96IP4 442 aaKnown RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 RBM24Q9BX46 236 aaKnown RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 C19orf12Q9NSK7 152 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 ASIC5Q9NY37 505 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 SPHK1Q9NYA1 384 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 PCDHGA7Q9Y5G6 932 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF736B4DX44 427 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 CA3P07451 260 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 XCR1P46094 333 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 CAMLGP49069 296 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 DLX5P56178 289 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 KIAA1024LP59773 190 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 GPR50Q13585 617 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 EXT1Q16394 746 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 TMEM52BQ4KMG9 183 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 PARS2Q7L3T8 475 aaKnown RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 SLC16A9Q7RTY1 509 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 L3MBTL4Q8NA19 623 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 OR9K2Q8NGE7 335 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 TMEM163Q8TC26 289 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 FUNDC2Q9BWH2 189 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 TMEM185BQ9H7F4 350 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 SMOXQ9NWM0 555 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 FAM53CQ9NYF3 392 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 B3GAT1Q9P2W7 334 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 EMC9Q9Y3B6 208 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 AHDC1Q5TGY3 1603 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 FEZF1A0PJY2 475 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 ANKRD33BA6NCL7 494 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF780AO75290 641 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 PAHP00439 452 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 HMGN2P05204 90 aaKnown RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 PBX2P40425 430 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 KIAA1211LQ6NV74 962 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 CCBE1Q6UXH8 406 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 CDHR3Q6ZTQ4 885 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 GTPBP8Q8N3Z3 284 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 GPR26Q8NDV2 337 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 CPT1CQ8TCG5 803 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 FRS2Q8WU20 508 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 FGF13Q92913 245 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 DNAJB11Q9UBS4 358 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 PTRH2Q9Y3E5 179 aaKnown RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 LYRM1O43325 122 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 CDC123O75794 336 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF888P0CJ79 500 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 GPX3P22352 226 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 PTBP1P26599 531 aaKnown RBP eCLIP10.07□□□□□ -0.81e-7■■■□□ 15.9
ACTN1-216ENST00000556083 ELK4P28324 431 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 ADH7P40394 386 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 C17orf67Q0P5P2 114 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 NFATC3Q12968 1075 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 CYP27C1Q4G0S4 372 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 MEPCEQ7L2J0 689 aaKnown RBP10.07□□□□□ -0.8
ACTN1-216ENST00000556083 NAGSQ8N159 534 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 OR51T1Q8NGJ9 327 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 OR5AR1Q8NGP9 310 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 FNDC9Q8TBE3 224 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 SAMD8Q96LT4 415 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 RBCK1Q9BYM8 510 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 SLA2Q9H6Q3 261 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 GPR45Q9Y5Y3 372 aa10.07□□□□□ -0.8
ACTN1-216ENST00000556083 CLDN24A6NM45 220 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 K7ERQ8 282 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 BCAT2O15382 392 aaPredicted RBP10.06□□□□□ -0.8
ACTN1-216ENST00000556083 MPPED1O15442 326 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 OLIG2Q13516 323 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 CARTPTQ16568 116 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 PGGHGQ32M88 737 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 LETMD1Q6P1Q0 360 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 GAREM2Q75VX8 874 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 ASRGL1Q7L266 308 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF610Q8N9Z0 462 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 SLC25A44Q96H78 314 aaPredicted RBP10.06□□□□□ -0.8
ACTN1-216ENST00000556083 ATOH8Q96SQ7 321 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 UHRF1Q96T88 793 aaPredicted RBP10.06□□□□□ -0.8
ACTN1-216ENST00000556083 DPH2Q9BQC3 489 aaPredicted RBP10.06□□□□□ -0.8
ACTN1-216ENST00000556083 PLEK2Q9NYT0 353 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 V9GY05 133 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms