RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 GRAMD2AQ8IUY3 354 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 GTPBP8Q8N3Z3 284 aaPredicted RBP18.48■□□□□ 0.55
VTI1B-205ENST00000555543 MEIOBQ8N635 442 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 ZNF614Q8N883 585 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 GLB1L3Q8NCI6 653 aaPredicted RBP18.48■□□□□ 0.55
VTI1B-205ENST00000555543 POC1BQ8TC44 478 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 INTS12Q96CB8 462 aaKnown RBP18.48■□□□□ 0.55
VTI1B-205ENST00000555543 PANX1Q96RD7 426 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 TM9SF2Q99805 663 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 HHATLQ9HCP6 504 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 SLC6A13Q9NSD5 602 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 ICAM5Q9UMF0 924 aa18.48■□□□□ 0.55
VTI1B-205ENST00000555543 ANKHD1Q8IWZ3 2542 aaKnown RBP18.48■□□□□ 0.55
VTI1B-205ENST00000555543 PRAMEF27A3QJZ7 478 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 C7orf72A4D263 438 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 CCDC154A6NI56 674 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 AK1P00568 194 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 GSNP06396 782 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 LINGO3P0C6S8 592 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 KHKP50053 298 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 ZNF41P51814 821 aaPredicted RBP18.47■□□□□ 0.55
VTI1B-205ENST00000555543 GPR68Q15743 365 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 C16orf62Q7Z3J2 963 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 DYDC1Q8WWB3 177 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 XAGE5Q8WWM1 108 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 FIG4Q92562 907 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 ZBTB8AQ96BR9 441 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 ZNF845Q96IR2 970 aaPredicted RBP18.47■□□□□ 0.55
VTI1B-205ENST00000555543 RNF145Q96MT1 663 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 EBF4Q9BQW3 602 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 NMUR2Q9GZQ4 415 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 INTS9Q9NV88 658 aaKnown RBP18.47■□□□□ 0.55
VTI1B-205ENST00000555543 ZIM2Q9NZV7 527 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 MKLN1Q9UL63 735 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 L3MBTL1Q9Y468 752 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 DTNAQ9Y4J8 743 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 AP4B1Q9Y6B7 739 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 MED12LQ86YW9 2145 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 MYO9AB2RTY4 2548 aa18.47■□□□□ 0.55
VTI1B-205ENST00000555543 SLC22A20A6NK97 555 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 EEF1E1-BLOC1S5C9J1V9 151 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 EEF1E1O43324 174 aaKnown RBP18.46■□□□□ 0.55
VTI1B-205ENST00000555543 STX11O75558 287 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 SSTR2P30874 369 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 FOXF1Q12946 379 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 ZNF141Q15928 474 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 FBXL19-AS1Q494R0 122 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 DNAJC14Q6Y2X3 702 aaPredicted RBP18.46■□□□□ 0.55
VTI1B-205ENST00000555543 RNF130Q86XS8 419 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 METTL25Q8N6Q8 603 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 ZNF524Q96C55 264 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 ARSGQ96EG1 525 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 C14orf79Q96F83 325 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 ZFP3Q96NJ6 502 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 PINK1Q9BXM7 581 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 EXD2Q9NVH0 621 aa18.46■□□□□ 0.55
VTI1B-205ENST00000555543 H3BNH8 94 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 SYT5O00445 386 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 HMGN4O00479 90 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 KIAA0513O60268 411 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 UGT2B17O75795 530 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 IL18BPO95998 194 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 OPN1LWP04000 364 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 IL6P05231 212 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 IL11P20809 199 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 UQCRC1P31930 480 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 OPRM1P35372 400 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 IDH3AP50213 366 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 P2RX1P51575 399 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 KRTAP10-9P60411 292 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 TLE4Q04727 773 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 TOMM34Q15785 309 aaPredicted RBP18.45■□□□□ 0.54
VTI1B-205ENST00000555543 MAPK14Q16539 360 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 TIGD2Q4W5G0 525 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 COX20Q5RI15 118 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 TYW3Q6IPR3 259 aaKnown RBP18.45■□□□□ 0.54
VTI1B-205ENST00000555543 FRRS1Q6ZNA5 592 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 ZNF621Q6ZSS3 439 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 CHMP1BQ7LBR1 199 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 FNDC9Q8TBE3 224 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 PNPT1Q8TCS8 783 aaKnown RBP18.45■□□□□ 0.54
VTI1B-205ENST00000555543 RNASE6Q93091 150 aaKnown RBP18.45■□□□□ 0.54
VTI1B-205ENST00000555543 ROPN1LQ96C74 230 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 ADGRG7Q96K78 797 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 SFXN3Q9BWM7 321 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 TMEM185BQ9H7F4 350 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 TCF7L2Q9NQB0 619 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 JKAMPQ9P055 326 aa18.45■□□□□ 0.54
VTI1B-205ENST00000555543 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 SERINC4A6NH21 518 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 GTPBP1O00178 669 aaKnown RBP18.44■□□□□ 0.54
VTI1B-205ENST00000555543 EIF1AYO14602 144 aaKnown RBP18.44■□□□□ 0.54
VTI1B-205ENST00000555543 TNFSF13O75888 250 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 TGDSO95455 350 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 NUDT14O95848 222 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 AGR2O95994 175 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 UBL4AP11441 157 aa18.44■□□□□ 0.54
VTI1B-205ENST00000555543 SUMO3P55854 103 aaPredicted RBP18.44■□□□□ 0.54
VTI1B-205ENST00000555543 EEFSECP57772 596 aaKnown RBP18.44■□□□□ 0.54
VTI1B-205ENST00000555543 LRRC74AQ0VAA2 488 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms