RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 FAM120AOSQ5T036 256 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 UTF1Q5T230 341 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 ATAD3BQ5T9A4 648 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 FAHD2BQ6P2I3 314 aaPredicted RBP4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 PAMR1Q6UXH9 720 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 SRCAPQ6ZRS2 3230 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 CLDN19Q8N6F1 224 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 C15orf54Q8N8G6 183 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 OR2T33Q8NG76 320 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 RLN3Q8WXF3 142 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 FAHD2AQ96GK7 314 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 TXN2Q99757 166 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 OMDQ99983 421 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 ERP44Q9BS26 406 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 CRNKL1Q9BZJ0 848 aaKnown RBP4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 POLR1EQ9GZS1 481 aaKnown RBP4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 TMEM117Q9H0C3 514 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 ATP10DQ9P241 1426 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 CHRNA9Q9UGM1 479 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 OARD1Q9Y530 152 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 BIVM-ERCC5R4GMW8 1640 aa4.08□□□□□ -1.76
CKS1BP1-201ENST00000555221 KIAA0586Q9BVV6 1533 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 GRIN2AQ12879 1464 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 RAPGEF2Q9Y4G8 1499 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 A0A1W2PQ72 361 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 MBLAC1A4D2B0 266 aaPredicted RBP4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 H0YCG3 227 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 EFNA2O43921 213 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 TPST2O60704 377 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 CABYRO75952 493 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 UGT2B4P06133 528 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 PRG2P13727 222 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 CBX1P83916 185 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 OTUD4Q01804 1114 aaKnown RBP4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 EWSR1Q01844 656 aaKnown RBP eCLIP4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 SELPLGQ14242 412 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 MESDQ14696 234 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 TMEM52BQ4KMG9 183 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 SPINK14Q6IE38 97 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 UFSP1Q6NVU6 142 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 PPP1R42Q7Z4L9 355 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 KIAA1328Q86T90 577 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 ZNF525Q8N782 197 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 IPMKQ8NFU5 416 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 OR5B2Q96R09 309 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 MEAF6Q9HAF1 191 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 GNG12Q9UBI6 72 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 RNF14Q9UBS8 474 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 RALGAPA1Q6GYQ0 2036 aa4.07□□□□□ -1.76
CKS1BP1-201ENST00000555221 EIF4G3O43432 1585 aaKnown RBP4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 HECW2Q9P2P5 1572 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 NUP160Q12769 1436 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 FRG2CA6NGY1 282 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 B4DXG7 233 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 K7EQM0 130 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 PHOX2AO14813 284 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 SCRG1O75711 98 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 NEBLO76041 1014 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 H2BFMP0C1H6 154 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 CPN1P15169 458 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 SERPINA2P20848 420 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 FASP25445 335 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 PRKAR2BP31323 418 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 RGS4P49798 205 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 MEOX2P50222 304 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 PPT1P50897 306 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 EFNA3P52797 238 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 AP3M2P53677 418 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 RAB40BQ12829 278 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 LAGE3Q14657 143 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 ZNF239Q16600 458 aaKnown RBP4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 PAGE2BQ5JRK9 111 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 CFAP157Q5JU67 520 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 ACOT1Q86TX2 421 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 GPR65Q8IYL9 337 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 GPR137CQ8N3F9 429 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 MRAPQ8TCY5 172 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 CTNNBL1Q8WYA6 563 aaPredicted RBP4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 PSMG2Q969U7 264 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 TTC25Q96NG3 672 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 ZNF607Q96SK3 696 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 RIT2Q99578 217 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 SLC6A7Q99884 636 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 MMP24Q9Y5R2 645 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 FLVCR1Q9Y5Y0 555 aa4.06□□□□□ -1.76
CKS1BP1-201ENST00000555221 GOLGA3Q08378 1498 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 PTPRGP23470 1445 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 DHRS7CA6NNS2 312 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 NPIPA7E9PJI5 369 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 MSH4O15457 936 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 LATO43561 262 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 SRSF10O75494 262 aaKnown RBP4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 PGK1P00558 417 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 F10P00742 488 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 NPIPA8P0DM63 369 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 GCFC2P16383 781 aaKnown RBP4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 PAX7P23759 505 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 ST3GAL3Q11203 375 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 SYPL1Q16563 259 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms