RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ABCA7Q8IZY2 2146 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 G3V4G9 280 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 SLC17A2O00624 439 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 RAMP1O60894 148 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 TSC22D2O75157 780 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 SNNO75324 88 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-213ENST00000554776 TRIM3O75382 744 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-213ENST00000554776 ZNF254O75437 659 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 SPAG6O75602 509 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 SCRG1O75711 98 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 LRATO95237 230 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 ADCY5O95622 1261 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 BCKDHAP12694 445 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 NCK1P16333 377 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 OTX2P32243 289 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 NF2P35240 595 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 VLDLRP98155 873 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 SPIBQ01892 262 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 OC90Q02509 493 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-213ENST00000554776 IL24Q13007 206 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 LAGE3Q14657 143 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 TGIF1Q15583 401 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 TATDN3Q17R31 274 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 C15orf32Q32M92 178 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 TIGITQ495A1 244 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 SLC25A30Q5SVS4 291 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 PVRIGQ6DKI7 326 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 SYT10Q6XYQ8 523 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 Q6ZR54 194 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 APTXQ7Z2E3 356 aaKnown RBP2.36□□□□□ -2.03
SCFD1-213ENST00000554776 HPS6Q86YV9 775 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 VSTM4Q8IW00 320 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 ANKFN1Q8N957 763 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 FBXO30Q8TB52 745 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 SLC5A11Q8WWX8 675 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 PSMG2Q969U7 264 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 PELI1Q96FA3 418 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 SH3YL1Q96HL8 342 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-213ENST00000554776 MS4A14Q96JA4 679 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 CYP2S1Q96SQ9 504 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 OPN3Q9H1Y3 402 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-213ENST00000554776 GLIPR2Q9H4G4 154 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 SLC17A5Q9NRA2 495 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.36□□□□□ -2.03
SCFD1-213ENST00000554776 GALPQ9UBC7 116 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 TP53TG3Q9ULZ0 132 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 L3MBTL1Q9Y468 752 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 WDR45Q9Y484 360 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 OARD1Q9Y530 152 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 ALG6Q9Y672 507 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 MAD1L1Q9Y6D9 718 aa2.36□□□□□ -2.03
SCFD1-213ENST00000554776 A0A1W2PQ72 361 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 CLRN2A0PK11 232 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 LRP5LA4QPB2 252 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 VSTM2BA6NLU5 285 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 KIF2AO00139 706 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-213ENST00000554776 ARPC3O15145 178 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 DUSP14O95147 198 aaKnown RBP2.35□□□□□ -2.03
SCFD1-213ENST00000554776 IL1BP01584 269 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 CD55P08174 381 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 PGCP20142 388 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 TBXA2RP21731 343 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 CALB2P22676 271 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 IGHV1-2P23083 117 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 GDF1P27539 372 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 LAP3P28838 519 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 TAGLN2P37802 199 aaKnown RBP2.35□□□□□ -2.03
SCFD1-213ENST00000554776 XCR1P46094 333 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 PPT1P50897 306 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 HSPA2P54652 639 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 AIF1P55008 147 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 RIPK4P57078 832 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 RND3P61587 244 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 RPS8P62241 208 aaKnown RBP2.35□□□□□ -2.03
SCFD1-213ENST00000554776 GPM6BQ13491 265 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 ASAH1Q13510 395 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 NDUFA9Q16795 377 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 QRICH1Q2TAL8 776 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 TP53I3Q53FA7 332 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 WSCD1Q658N2 575 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 ATL3Q6DD88 541 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 CENPPQ6IPU0 288 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 ZSCAN25Q6NSZ9 544 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 UFSP1Q6NVU6 142 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 MARCH9Q86YJ5 346 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 C9orf40Q8IXQ3 194 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 GPR65Q8IYL9 337 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 UBQLNLQ8IYU4 475 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 ZCCHC7Q8N3Z6 543 aaKnown RBP2.35□□□□□ -2.03
SCFD1-213ENST00000554776 KIR3DL3Q8N743 410 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 KLHL30-AS1Q8NEE0 82 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 STEAP2Q8NFT2 490 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 TRMT10AQ8TBZ6 339 aaKnown RBP2.35□□□□□ -2.03
SCFD1-213ENST00000554776 AENQ8WTP8 325 aaKnown RBP2.35□□□□□ -2.03
SCFD1-213ENST00000554776 TFB1MQ8WVM0 346 aaKnown RBP2.35□□□□□ -2.03
SCFD1-213ENST00000554776 ZNF606Q8WXB4 792 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 TMEM80Q96HE8 168 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 CELF6Q96J87 481 aaKnown RBP2.35□□□□□ -2.03
SCFD1-213ENST00000554776 PSKH2Q96QS6 385 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 OR5B2Q96R09 309 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms