RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 GALNT8Q9NY28 637 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 KLRF1Q9NZS2 232 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 CD300AQ9UGN4 299 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 BAIAP2L1Q9UHR4 511 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 GPR55Q9Y2T6 319 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-215ENST00000554656 RAI1Q7Z5J4 1906 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-215ENST00000554656 HEATR5AQ86XA9 2040 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 OR6C70A6NIJ9 312 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 CLCA1A8K7I4 914 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 H0Y3Z8 333 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 PLOD2O00469 737 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 SIAH2O43255 324 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 GUCY1B2O75343 617 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 FKBP6O75344 327 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 RAF1P04049 648 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 HRGP04196 525 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 IL3P08700 152 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 ZCCHC18P0CG32 403 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 OPRM1P35372 400 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 DGKQP52824 942 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 CLDN18P56856 261 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 B3GALT5-AS1P59052 145 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 SRYQ05066 204 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 CEACAM7Q14002 265 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 POU4F3Q15319 338 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 PRSS53Q2L4Q9 553 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 DEFB113Q30KQ7 82 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 C1orf146Q5VVC0 180 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 FAM71E1Q6IPT2 247 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 AAGABQ6PD74 315 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 DLEU7Q6UYE1 221 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 LUZP2Q86TE4 346 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 KIF18BQ86Y91 864 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 WFDC11Q8NEX6 87 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 OR9A2Q8NGT5 310 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 OR14L1PQ8NHC6 308 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 CLHC1Q8NHS4 586 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 INTS12Q96CB8 462 aaKnown RBP9.57□□□□□ -0.88
SHMT2-215ENST00000554656 ASB9Q96DX5 294 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 LRRC46Q96FV0 321 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 SLC35A4Q96G79 324 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 EGLN2Q96KS0 407 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 VSTM2LQ96N03 204 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 CCDC115Q96NT0 180 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 COL21A1Q96P44 957 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 UCN2Q96RP3 112 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 RBM24Q9BX46 236 aaKnown RBP9.57□□□□□ -0.88
SHMT2-215ENST00000554656 EBPLQ9BY08 206 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 DCLRE1BQ9H816 532 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 BTNL2Q9UIR0 455 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 UTS2RQ9UKP6 389 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 POMPQ9Y244 141 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 CFL2Q9Y281 166 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 WIF1Q9Y5W5 379 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 GMEB1Q9Y692 573 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 ARID1AO14497 2285 aa9.57□□□□□ -0.88
SHMT2-215ENST00000554656 FN1P02751 2386 aaKnown RBP9.57□□□□□ -0.88
SHMT2-215ENST00000554656 TRBV5-3A0A0A0MS03 114 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 PRSS51A0A1B0GVH4 220 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 C9JVG2 144 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 RNASET2O00584 256 aaKnown RBP9.56□□□□□ -0.88
SHMT2-215ENST00000554656 HCRTR2O43614 444 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 ZIC3O60481 467 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 SCN2BO60939 215 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 REM1O75628 298 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 CBR3O75828 277 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 TNFSF13O75888 250 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 RCBTB2O95199 551 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 ATP6V1G2O95670 118 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 TGM6O95932 706 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 DRD2P14416 443 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 ZNF708P17019 499 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 HOXB9P17482 250 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-215ENST00000554656 CD53P19397 219 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 TCEA1P23193 301 aaKnown RBP9.56□□□□□ -0.88
SHMT2-215ENST00000554656 PPIBP23284 216 aaKnown RBP9.56□□□□□ -0.88
SHMT2-215ENST00000554656 SRD5A2P31213 254 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 SLC7A2P52569 658 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 DCAF7P61962 342 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 TRIM25Q14258 630 aaKnown RBP9.56□□□□□ -0.88
SHMT2-215ENST00000554656 KPNB1Q14974 876 aaKnown RBP9.56□□□□□ -0.88
SHMT2-215ENST00000554656 HEPACAMQ14CZ8 416 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 SF3B4Q15427 424 aaKnown RBP eCLIP9.56□□□□□ -0.886e-8■■■■■ 30.6
SHMT2-215ENST00000554656 FXNQ16595 210 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 CPTPQ5TA50 214 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 OR5M10Q6IEU7 315 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 NANOGP8Q6NSW7 305 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 SLC2A7Q6PXP3 512 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 IFNEQ86WN2 208 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 PLCZ1Q86YW0 608 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 SLC15A3Q8IY34 581 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 CCDC116Q8IYX3 515 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 OR7G2Q8NG99 324 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 OR4N2Q8NGD1 307 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 WNT2BQ93097 391 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 EXOSC8Q96B26 276 aaKnown RBP9.56□□□□□ -0.88
SHMT2-215ENST00000554656 CLPTM1LQ96KA5 538 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 ANKRD27Q96NW4 1050 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 ADOQ96SZ5 270 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms