RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 MRGPRFQ96AM1 343 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SMIM19Q96E16 107 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 TCEAL4Q96EI5 215 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF607Q96SK3 696 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 RNF167Q9H6Y7 350 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 TEX10Q9NXF1 929 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 NLGN3Q9NZ94 848 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 MAT2BQ9NZL9 334 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF232Q9UNY5 417 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 A0A087WUJ7 227 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 TBC1D3IA0A087WXS9 549 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 A0A0B4J2A0 478 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 A0A1B0GVI7 797 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 LILRA5A6NI73 299 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 MPTX1A8MV57 137 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 FAM157AC9JC47 383 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 FTCDNL1E5RQL4 147 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 C1QTNF3-AMACRE9PGA6 284 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 FGF16O43320 207 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 CHST10O43529 356 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 DNAJB6O75190 326 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 RDH16O75452 317 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 UBL3O95164 117 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 FADS2O95864 444 aaKnown RBP3.17□□□□□ -1.9
SEC23A-207ENST00000554615 ADH1CP00326 375 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 C8AP07357 584 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 HOXB2P14652 356 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 HOXB1P14653 301 aaPredicted RBP3.17□□□□□ -1.9
SEC23A-207ENST00000554615 ELNP15502 786 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 RAB6AP20340 208 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 GPC1P35052 558 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 XKP51811 444 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 ARHGDIAP52565 204 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 PER3P56645 1201 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 RAB38P57729 211 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 CYP4F8P98187 520 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 IRF8Q02556 426 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 ACSM2AQ08AH3 577 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF234Q14588 700 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 MFSD13AQ14CX5 517 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 IRF4Q15306 451 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 ZMYND11Q15326 602 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 TEAD2Q15562 447 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 UBE2NLQ5JXB2 153 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 ACSM2BQ68CK6 577 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 FAM111BQ6SJ93 734 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 PAMR1Q6UXH9 720 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 IDO2Q6ZQW0 420 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 Q6ZVL8 140 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 PLD3Q8IV08 490 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 LAX1Q8IWV1 398 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 ELMO1Q92556 727 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 DPH7Q9BTV6 452 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 EGLN1Q9GZT9 426 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 SFXN1Q9H9B4 322 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 NEK6Q9HC98 313 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 LANCL2Q9NS86 450 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 SHPKQ9UHJ6 478 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 GMEB2Q9UKD1 530 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 DAPP1Q9UN19 280 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 FOXJ3Q9UPW0 622 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 MOKQ9UQ07 419 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 INSL6Q9Y581 213 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 TBC1D3EA0A087X179 549 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 WIPF3A6NGB9 483 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 C1QTNF9BB2RNN3 333 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 hCG_2039718K7EN88 272 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 PLD2O14939 933 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 SH3BP5O60239 455 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 FOXD2O60548 495 aaPredicted RBP3.17□□□□□ -1.9
SEC23A-207ENST00000554615 SELENOFO60613 162 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 ICMTO60725 284 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 ADAM11O75078 769 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 AQP8O94778 261 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 IGKV1D-16P01601 117 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 BGLAPP02818 100 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 ANKRD34CP0C6C1 535 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 PSKH1P11801 424 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 PNLIPP16233 465 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 MAKP20794 623 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 GABRR2P28476 465 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 ALDH4A1P30038 563 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 GKP32189 559 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 FASLGP48023 281 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 EMDP50402 254 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 METAP1P53582 386 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 RAB25P57735 213 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 SKP2Q13309 424 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 CDH18Q13634 790 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 GRIN2CQ14957 1233 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 SF3B4Q15427 424 aaKnown RBP eCLIP3.17□□□□□ -1.9
SEC23A-207ENST00000554615 TSTQ16762 297 aaKnown RBP3.17□□□□□ -1.9
SEC23A-207ENST00000554615 ZIK1Q3SY52 487 aaPredicted RBP3.17□□□□□ -1.9
SEC23A-207ENST00000554615 SLC27A4Q6P1M0 643 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 FAHD2BQ6P2I3 314 aaPredicted RBP3.17□□□□□ -1.9
SEC23A-207ENST00000554615 SCIMPQ6UWF3 145 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 LYPD8Q6UX82 237 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 DPY19L2P2Q6ZN68 376 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 Q6ZS49 121 aa3.17□□□□□ -1.9
SEC23A-207ENST00000554615 Q6ZVU0 165 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms