RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PINK1Q9BXM7 581 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 TRIM8Q9BZR9 551 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 SERHL2Q9H4I8 314 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 SLCO1B3Q9NPD5 702 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF629Q9UEG4 869 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-213ENST00000554600 BTNL2Q9UIR0 455 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 MKLN1Q9UL63 735 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 CARD8Q9Y2G2 431 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 TACC2O95359 2948 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 CCDC154A6NI56 674 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 EIF1AYO14602 144 aaKnown RBP9.62□□□□□ -0.87
SHMT2-213ENST00000554600 TNFRSF21O75509 655 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 STX11O75558 287 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 ANP32DO95626 131 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 AGR2O95994 175 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 OPN1LWP04000 364 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 ME2P23368 584 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 CPA2P48052 419 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 ANXA11P50995 505 aaKnown RBP9.62□□□□□ -0.87
SHMT2-213ENST00000554600 SUCLG1P53597 346 aaKnown RBP9.62□□□□□ -0.87
SHMT2-213ENST00000554600 CLDN20P56880 219 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 STX1BP61266 288 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 LRRC74AQ0VAA2 488 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 FOXF2Q12947 444 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 GSTA3Q16772 222 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 NDUFAF6Q330K2 333 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 ARHGAP11BQ3KRB8 267 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 PDCD4Q53EL6 469 aaKnown RBP9.62□□□□□ -0.87
SHMT2-213ENST00000554600 PDZK1Q5T2W1 519 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 SAXO2Q658L1 398 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 MTERF4Q7Z6M4 381 aaKnown RBP9.62□□□□□ -0.87
SHMT2-213ENST00000554600 RNF130Q86XS8 419 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 DMRTC2Q8IXT2 367 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF295-AS1Q8N0V1 137 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 MIER2Q8N344 545 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 CNEP1R1Q8N9A8 125 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 PNPT1Q8TCS8 783 aaKnown RBP9.62□□□□□ -0.87
SHMT2-213ENST00000554600 ZBTB8AQ96BR9 441 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 NEURL3Q96EH8 262 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 MAELQ96JY0 434 aaKnown RBP9.62□□□□□ -0.87
SHMT2-213ENST00000554600 RNF145Q96MT1 663 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 ZFP3Q96NJ6 502 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 CCDC115Q96NT0 180 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 SH3GL2Q99962 352 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF559Q9BR84 538 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 PRRG4Q9BZD6 226 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 ACBD3Q9H3P7 528 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 TMEM185BQ9H7F4 350 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 TCF7L2Q9NQB0 619 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 MED17Q9NVC6 651 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 CLCF1Q9UBD9 225 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 DTNAQ9Y4J8 743 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 AP4B1Q9Y6B7 739 aa9.62□□□□□ -0.87
SHMT2-213ENST00000554600 ADGRG4Q8IZF6 3080 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 RFXANKO14593 260 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF195O14628 629 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 OIP5O43482 229 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 FCMRO60667 390 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 SMNDC1O75940 238 aaKnown RBP eCLIP9.61□□□□□ -0.87
SHMT2-213ENST00000554600 RCBTB2O95199 551 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 TGM6O95932 706 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 IL6P05231 212 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 UBL4AP11441 157 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF17P17021 662 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 SFTPDP35247 375 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 CDKN2CP42773 168 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 EIF1AXP47813 144 aaKnown RBP9.61□□□□□ -0.87
SHMT2-213ENST00000554600 P2RX1P51575 399 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 POLR2JP52435 117 aaKnown RBP9.61□□□□□ -0.87
SHMT2-213ENST00000554600 DLX5P56178 289 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 CLDN15P56746 228 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 SIRPAP78324 504 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 PON3Q15166 354 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 PLPPR5Q32ZL2 321 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 TIGD2Q4W5G0 525 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 KLHL26Q53HC5 615 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 C6orf10Q5SRN2 563 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.61□□□□□ -0.87
SHMT2-213ENST00000554600 OR2A2Q6IF42 318 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 CBLN3Q6UW01 205 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 EPGNQ6UW88 154 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 LUZP2Q86TE4 346 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 GTPBP8Q8N3Z3 284 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-213ENST00000554600 CHDHQ8NE62 594 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-213ENST00000554600 ATP6V1C2Q8NEY4 427 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 OR9I1Q8NGQ6 314 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 MIPOL1Q8TD10 442 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 FIG4Q92562 907 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 RNASE6Q93091 150 aaKnown RBP9.61□□□□□ -0.87
SHMT2-213ENST00000554600 ROPN1LQ96C74 230 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF845Q96IR2 970 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-213ENST00000554600 SFXN3Q9BWM7 321 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 NMUR2Q9GZQ4 415 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 RMND5AQ9H871 391 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 SLC24A3Q9HC58 644 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 ZIM2Q9NZV7 527 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 WDR45Q9Y484 360 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 PRR14LQ5THK1 2151 aa9.61□□□□□ -0.87
SHMT2-213ENST00000554600 SERINC4A6NH21 518 aa9.6□□□□□ -0.87
SHMT2-213ENST00000554600 NPIPB9F8W1W9 429 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms