RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 GDPD3Q7L5L3 318 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SLC46A3Q7Z3Q1 461 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PRSS42Q7Z5A4 293 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SYT9Q86SS6 491 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TRABD2AQ86V40 505 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 DTX1Q86Y01 620 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 WFDC3Q8IUB2 231 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 RASGRP3Q8IV61 690 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 IFT20Q8IY31 132 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SLC22A18ASQ8N1D0 253 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PCDH20Q8N6Y1 951 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 BCORP1Q8N888 145 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SYT14Q8NB59 555 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF548Q8NEK5 533 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ELOA3Q8NG57 546 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 OR4C15Q8NGM1 316 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 KCNG3Q8TAE7 436 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 AGAP11Q8TF27 550 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 OIT3Q8WWZ8 545 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 C22orf15Q8WYQ4 148 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 AP3S1Q92572 193 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 GTF2H4Q92759 462 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CAVIN3Q969G5 261 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SLC35C1Q96A29 364 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ASB9Q96DX5 294 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 MYEOVQ96EZ4 313 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TSSK3Q96PN8 268 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SGPP1Q9BX95 441 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CEP41Q9BYV8 373 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 NUAK2Q9H093 628 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 METTL9Q9H1A3 318 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 POPDC2Q9HBU9 364 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 LPAR2Q9HBW0 351 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 IFT46Q9NQC8 304 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FAIMQ9NVQ4 179 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TAS2R14Q9NYV8 317 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TAS2R9Q9NYW1 312 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ABCD2Q9UBJ2 740 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 UBQLN2Q9UHD9 624 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 MRM2Q9UI43 246 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SLC25A13Q9UJS0 675 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ZFR2Q9UPR6 939 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 MGAT4BQ9UQ53 548 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 NEU2Q9Y3R4 380 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TESMINQ9Y4I5 508 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ATG4BQ9Y4P1 393 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PCDHGC4Q9Y5F7 938 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ST14Q9Y5Y6 855 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SPTBN2O15020 2390 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 PTPRQQ9UMZ3 2332 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 A0A0U1RRA0 63 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ILVBLA1L0T0 632 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 PRSS37A4D1T9 235 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 GRID2IPA4D2P6 1211 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 GMNCA6NCL1 334 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 TUBAL3A6NHL2 446 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 E7ESA3 106 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 LMO7DNF2Z398 122 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 M0QXV9 152 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 KDELR3O43731 214 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 MGRN1O60291 552 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 LEFTY1O75610 366 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 RGS9O75916 674 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 SEC14L2O76054 403 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 TXNDC12O95881 172 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 PRB1P04280 392 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CEACAM5P06731 702 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 KLK3P07288 261 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CTSLP07711 333 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ANXA5P08758 320 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ANXA4P09525 319 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 LIPCP11150 499 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 IFI30P13284 250 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CBR1P16152 277 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 MSR1P21757 451 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 OTX2P32243 289 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 PHBP35232 272 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ARL1P40616 181 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 GRIA1P42261 906 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 GCLMP48507 274 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 PSMD8P48556 350 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CXCR3P49682 368 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 AP1S2P56377 157 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 GNG2P59768 71 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 HPCAP84074 193 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 FKBP3Q00688 224 aaKnown RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 HSF2Q03933 536 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CNTN1Q12860 1018 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 PPP1R8Q12972 351 aaKnown RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 NAE1Q13564 534 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 PDK3Q15120 406 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 MANEALQ5VSG8 457 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 GPRIN3Q6ZVF9 776 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 GDF7Q7Z4P5 450 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 PARGQ86W56 976 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 DHFR2Q86XF0 187 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 RNF130Q86XS8 419 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 MMAAQ8IVH4 418 aaKnown RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 GID4Q8IVV7 300 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms