RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 ATP6V1HQ9UI12 483 aa3.95□□□□□ -1.78
CHD8-207ENST00000554384 LAMA3Q16787 3333 aa3.95□□□□□ -1.78
CHD8-207ENST00000554384 HCFC1P51610 2035 aa3.95□□□□□ -1.78
CHD8-207ENST00000554384 INSRP06213 1382 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 A0A1B0GUL7 405 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 A0A1W2PQ72 361 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 FRG2CA6NGY1 282 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 RHBDL1O75783 438 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 SLC35E2P0CK97 266 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 LAMP1P11279 417 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 XRCC1P18887 633 aaPredicted RBP3.94□□□□□ -1.78
CHD8-207ENST00000554384 IL2RGP31785 369 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 NUCB2P80303 420 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 KLHL30Q0D2K2 578 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 SCGB2A2Q13296 93 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 SEL1L3Q68CR1 1132 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 ZNF600Q6ZNG1 722 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 GCNT2Q8N0V5 402 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 BEST4Q8NFU0 473 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 GIPC3Q8TF64 312 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 C18orf25Q96B23 403 aaPredicted RBP3.94□□□□□ -1.78
CHD8-207ENST00000554384 TADA1Q96BN2 335 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 PSMB7Q99436 277 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 TMEM121Q9BTD3 319 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 TBC1D10AQ9BXI6 508 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 RHOJQ9H4E5 214 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 TIGARQ9NQ88 270 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 POLE3Q9NRF9 147 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 AGPAT5Q9NUQ2 364 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 CHRNA9Q9UGM1 479 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 SLC2A6Q9UGQ3 507 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 BARX2Q9UMQ3 279 aaPredicted RBP3.94□□□□□ -1.78
CHD8-207ENST00000554384 DUSP12Q9UNI6 340 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 DHRS7Q9Y394 339 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 EXOSC1Q9Y3B2 195 aaKnown RBP3.94□□□□□ -1.78
CHD8-207ENST00000554384 MFHAS1Q9Y4C4 1052 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 HTTP42858 3142 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 SCN11AQ9UI33 1791 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 TTC21AQ8NDW8 1320 aa3.94□□□□□ -1.78
CHD8-207ENST00000554384 SCN4AP35499 1836 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 KDRP35968 1356 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 CCDC88AQ3V6T2 1871 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 IGKV3D-20A0A0C4DH25 116 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 EFCAB7A8K855 629 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 PPIHO43447 177 aaKnown RBP3.93□□□□□ -1.78
CHD8-207ENST00000554384 GUCA1CO95843 209 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 JCHAINP01591 159 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 IGFBP1P08833 259 aaPredicted RBP3.93□□□□□ -1.78
CHD8-207ENST00000554384 MDH1P40925 334 aaKnown RBP3.93□□□□□ -1.78
CHD8-207ENST00000554384 OR1D4P47884 311 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 ARHGDIBP52566 201 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 SLC8A3P57103 927 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 ERVPABLB-1P60509 514 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 PAX2Q02962 417 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 IL18R1Q13478 541 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 HIGD2BQ4VC39 106 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 ZNF57Q68EA5 555 aaPredicted RBP3.93□□□□□ -1.78
CHD8-207ENST00000554384 ZNF774Q6NX45 483 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 ARSKQ6UWY0 536 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 AGAP11Q8TF27 550 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 HPDLQ96IR7 371 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 FOXN4Q96NZ1 517 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 APOL2Q9BQE5 337 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 FAM120CQ9NX05 1096 aaKnown RBP3.93□□□□□ -1.78
CHD8-207ENST00000554384 RDH8Q9NYR8 311 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 TTC28Q96AY4 2481 aa3.93□□□□□ -1.78
CHD8-207ENST00000554384 CD163L1Q9NR16 1453 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 KTN1Q86UP2 1357 aaKnown RBP3.92□□□□□ -1.78
CHD8-207ENST00000554384 ZSCAN5BA6NJL1 495 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 FAM74A7A6NL05 159 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 EFNA2O43921 213 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 LCMT2O60294 686 aaKnown RBP3.92□□□□□ -1.78
CHD8-207ENST00000554384 TSC22D2O75157 780 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 HEXBP07686 556 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 ANXA3P12429 323 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 DESP17661 470 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 PTBP1P26599 531 aaKnown RBP eCLIP3.92□□□□□ -1.78
CHD8-207ENST00000554384 DPP4P27487 766 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 TAF6P49848 677 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 PLOD1Q02809 727 aaPredicted RBP3.92□□□□□ -1.78
CHD8-207ENST00000554384 CHI3L2Q15782 390 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 MICAQ29983 383 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 TIMM50Q3ZCQ8 353 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 FAM74A3Q4VXF1 159 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 PARGQ86W56 976 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 ERC1Q8IUD2 1116 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 CBWD2Q8IUF1 395 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.92□□□□□ -1.78
CHD8-207ENST00000554384 RHOXF1Q8NHV9 184 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 UPRTQ96BW1 309 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 ELMO2Q96JJ3 720 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 THUMPD2Q9BTF0 503 aaKnown RBP3.92□□□□□ -1.78
CHD8-207ENST00000554384 TBCDQ9BTW9 1192 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 FICDQ9BVA6 458 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 TM2D1Q9BX74 207 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 MRPL13Q9BYD1 178 aaKnown RBP3.92□□□□□ -1.78
CHD8-207ENST00000554384 CGNQ9P2M7 1197 aaKnown RBP3.92□□□□□ -1.78
CHD8-207ENST00000554384 RSPH14Q9UHP6 348 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 B9D1Q9UPM9 204 aa3.92□□□□□ -1.78
CHD8-207ENST00000554384 NTNG1Q9Y2I2 539 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms